Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013339.1 Kokia drynarioides strain JFW-HI SEQ_128361, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46210

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9787--10101
59
5.4
57
84
11
358
32
5
28
33
1.79
9823--10108
29
9.7
29
79
12
300
32
5
27
33
1.79
9787--10101
118
2.7
118
86
6
419
32
5
28
33
1.79
11108--11161
16
3.6
16
69
19
53
46
1
0
51
1.11
11087--11143
19
2.9
19
86
5
78
40
1
1
56
1.20
13465--13779
59
5.4
57
84
11
358
32
5
28
33
1.79
13501--13786
29
9.7
29
79
12
300
32
5
27
33
1.79
13465--13779
118
2.7
118
86
6
419
32
5
28
33
1.79
14786--14839
16
3.6
16
69
19
53
46
1
0
51
1.11
14765--14821
19
2.9
19
86
5
78
40
1
1
56
1.20
15445--15489
15
3.0
15
96
0
81
17
13
28
40
1.88
15520--15581
16
3.8
16
78
6
70
50
4
0
45
1.23
15535--15587
17
3.2
17
84
7
65
52
9
0
37
1.34
20957--21110
76
2.0
76
100
0
308
50
3
10
35
1.55
22522--22625
47
2.2
47
94
0
181
34
20
9
35
1.85
23377--23451
28
2.6
28
75
10
71
36
2
0
61
1.10
26299--26337
11
3.6
11
86
6
53
30
0
2
66
1.05
27937--27996
30
2.0
30
83
3
75
43
1
13
41
1.54
31330--31370
21
2.0
21
85
9
57
39
4
0
56
1.21
32727--32771
19
2.4
19
81
7
56
37
0
4
57
1.19
33591--33633
21
2.0
21
90
4
68
13
6
4
74
1.19
39448--39517
35
2.0
35
85
0
95
38
12
14
34
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41644--41693
24
2.1
23
85
14
66
30
14
6
50
1.66
42079--42110
2
16.5
2
93
6
57
50
0
0
50
1.00

Tables:   1

The End!