Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013369.1 Kokia drynarioides strain JFW-HI SEQ_128392, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51467

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3911--3954
20
2.2
20
88
8
63
70
2
13
13
1.26
3910--3946
14
2.7
14
88
12
51
70
2
13
13
1.28
7699--7737
18
2.2
18
100
0
78
12
20
10
56
1.65
12845--12899
19
2.7
19
83
8
56
69
9
3
18
1.30
12885--12963
27
2.8
28
67
16
65
62
7
0
30
1.23
13682--13921
10
24.8
10
66
17
53
33
1
3
60
1.24
13784--13878
36
2.6
36
80
12
97
34
3
2
60
1.25
13875--13920
22
2.1
22
83
0
56
19
0
6
73
1.04
13973--14011
10
3.7
10
86
6
51
71
2
0
25
0.98
22299--22323
13
1.9
13
100
0
50
32
20
16
32
1.94
32992--33050
22
2.7
23
81
5
68
30
18
22
28
1.97
34451--34508
23
2.5
23
88
0
80
44
15
5
34
1.69
34518--34617
25
4.1
25
83
5
141
46
18
6
30
1.73
37755--37827
29
2.5
29
84
8
96
31
23
6
38
1.81
41113--41137
8
3.1
8
100
0
50
24
0
40
36
1.55
42816--42951
60
2.3
59
84
2
173
25
11
10
52
1.69
42826--42976
60
2.5
60
81
3
169
23
11
10
54
1.66
43197--43334
31
4.5
31
76
11
115
49
10
13
26
1.75
43565--43632
31
2.2
30
80
10
75
33
10
16
39
1.82
45997--46041
19
2.4
19
85
7
56
53
2
2
42
1.25
48045--48090
21
2.1
23
88
8
69
23
30
2
43
1.66
50634--50695
24
2.6
24
87
2
90
29
14
22
33
1.94

Tables:   1

The End!