Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013385.1 Kokia drynarioides strain JFW-HI SEQ_128408, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  115927

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
306--347
4
10.8
4
82
14
52
2
21
0
76
0.90
303--358
11
4.9
11
80
8
58
3
23
0
73
0.99
3562--3652
41
2.2
41
94
0
155
65
9
7
16
1.44
14187--14273
29
3.2
29
61
15
76
42
17
11
28
1.84
14167--14284
53
2.2
53
95
1
211
42
14
10
33
1.79
17972--18028
28
2.0
28
100
0
114
22
0
14
63
1.30
20714--20777
27
2.4
27
94
0
119
23
29
28
18
1.98
28899--28925
12
2.2
12
100
0
54
14
22
14
48
1.81
29914--29959
22
2.0
23
84
12
60
52
0
8
39
1.33
29922--29965
22
2.0
22
86
8
63
52
0
6
40
1.28
30546--30577
2
16.0
2
100
0
64
50
0
0
50
1.00
36309--36395
43
2.1
41
82
8
104
67
16
4
11
1.37
36372--36404
12
2.8
12
90
0
57
78
9
3
9
1.05
36353--36404
24
2.2
24
85
0
68
71
13
3
11
1.28
57239--57351
28
4.1
28
75
4
88
35
18
17
28
1.94
57239--57299
27
2.2
27
85
2
77
31
16
21
31
1.95
57239--57330
28
3.3
27
78
1
94
34
16
20
28
1.94
59905--59938
9
3.4
10
88
12
52
35
5
8
50
1.58
59934--60004
21
3.5
21
69
21
69
39
9
4
46
1.57
65988--66062
21
3.6
21
78
5
73
32
22
13
32
1.93
66731--66970
52
4.6
53
80
8
210
36
20
14
27
1.92
66781--66970
104
1.8
105
85
7
271
36
20
14
28
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70323--70361
6
6.5
6
87
0
51
46
0
30
23
1.53
75206--75235
15
1.9
16
93
6
53
40
0
6
53
1.27
76781--76811
16
1.9
16
93
0
53
25
22
6
45
1.76
78778--78999
29
7.6
29
81
8
218
31
28
5
33
1.81
78778--79058
59
4.8
59
86
3
259
31
28
6
33
1.82
78792--78999
88
2.4
86
80
10
224
31
29
6
33
1.82
78778--79058
29
9.6
29
76
12
161
31
28
6
33
1.82
78888--79146
59
4.4
59
81
6
258
32
28
5
33
1.81
78888--79146
117
2.2
118
79
6
276
32
28
5
33
1.81
81976--82002
4
6.8
4
100
0
54
22
0
0
77
0.76
83605--83652
19
2.5
19
79
3
60
60
0
2
37
1.09
85262--85304
4
11.0
4
90
5
61
44
25
4
25
1.73
94034--94095
31
2.0
31
96
0
115
25
8
12
53
1.66
95357--95401
22
2.0
22
100
0
90
26
17
17
37
1.93
96914--96948
17
2.2
17
90
10
56
28
0
0
71
0.86
98003--98043
19
2.1
20
86
4
57
51
0
0
48
1.00
112742--112798
23
2.5
23
88
0
87
28
22
22
26
1.99
113525--113570
10
4.6
10
82
17
51
2
13
0
84
0.71
113524--113572
21
2.3
21
89
3
71
2
12
0
85
0.68
113524--113572
23
2.2
22
88
3
71
2
12
0
85
0.68
113524--113572
11
4.6
10
85
10
62
2
12
0
85
0.68
113524--113578
11
5.1
11
84
8
60
3
12
1
81
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
113590--113640
26
2.0
27
84
7
70
3
17
1
76
1.03

Tables:   1

The End!