Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013389.1 Kokia drynarioides strain JFW-HI SEQ_128412, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  189382

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13885--13925
12
3.4
12
81
18
50
0
34
0
65
0.93
22767--22827
29
2.1
29
96
0
113
31
4
29
34
1.79
38746--38800
21
2.6
21
91
0
92
41
23
16
18
1.89
56825--56970
72
2.0
73
97
1
276
25
28
11
34
1.91
61976--62015
21
1.9
21
85
10
55
2
35
0
62
1.09
80239--80336
23
3.9
26
69
15
71
35
3
0
61
1.12
80292--80333
15
2.8
15
75
13
50
30
4
0
64
1.14
88877--89029
34
4.5
34
83
0
171
19
11
32
35
1.88
91432--91460
2
14.5
2
100
0
58
51
0
0
48
1.00
92148--92197
24
2.1
24
100
0
100
46
10
8
36
1.67
92200--92224
7
3.6
7
100
0
50
60
12
0
28
1.32
93170--93211
18
2.1
21
83
12
54
64
2
0
33
1.07
105000--105059
28
2.2
27
87
3
84
23
33
23
20
1.97
110058--110149
38
2.3
40
81
7
143
40
16
13
30
1.86
112981--113030
21
2.4
21
89
0
73
34
32
18
16
1.92
118273--118306
14
2.2
16
90
10
54
0
14
2
82
0.79
121473--121564
6
15.2
6
70
20
59
76
0
20
3
0.93
121459--121566
26
4.2
26
89
4
157
76
0
19
3
0.93
121459--121564
16
6.3
16
75
17
83
76
0
19
3
0.94
121473--121556
10
9.1
10
75
16
67
75
0
21
3
0.96
129485--129580
31
3.1
32
85
5
117
37
9
6
46
1.61
132887--132928
21
2.0
21
100
0
84
57
19
4
19
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
133608--133662
25
2.2
26
87
6
78
12
18
5
63
1.47
140051--140116
19
3.7
19
72
25
72
10
16
0
72
1.11
140047--140113
33
2.0
33
100
0
134
11
14
0
73
1.11
140060--140126
16
4.2
15
75
19
64
10
14
1
73
1.17
145525--145549
13
1.9
13
100
0
50
32
20
0
48
1.50
150799--150840
19
2.2
19
100
0
84
14
30
30
23
1.94
156576--156618
19
2.3
19
87
0
59
46
20
6
25
1.76
163670--163710
18
2.3
18
91
8
66
26
0
4
68
1.10
165476--165526
19
2.8
17
80
19
50
23
13
5
56
1.59
166020--166085
30
2.2
29
81
10
78
34
4
10
50
1.58
166726--166796
18
3.7
18
73
19
63
54
2
0
42
1.14
166761--166812
18
2.9
18
83
11
54
53
0
0
46
1.00
166726--166812
28
3.0
29
74
14
90
54
2
0
43
1.13
167113--167154
16
2.6
16
85
10
59
33
0
0
66
0.92
167107--167161
22
2.4
23
87
6
85
36
1
0
61
1.06
167111--167152
17
2.5
17
88
7
59
33
0
0
66
0.92
167104--167166
22
2.9
21
80
17
74
36
1
1
60
1.16
167483--167515
2
16.5
2
100
0
66
51
0
0
48
1.00
174481--175277
149
5.4
148
83
5
889
42
9
3
43
1.55
175685--175713
3
9.7
3
100
0
58
65
0
0
34
0.93
175733--175759
11
2.5
11
100
0
54
85
0
14
0
0.61
179586--179635
19
2.7
19
81
9
59
42
0
2
56
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179605--179639
12
2.9
12
91
8
54
40
0
0
60
0.97
179612--179645
17
1.9
18
88
5
52
38
0
2
58
1.13
186054--186102
18
2.8
18
84
6
57
22
2
0
75
0.90
186053--186086
6
5.7
6
100
0
68
17
0
0
82
0.67

Tables:   1

The End!