Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013396.1 Kokia drynarioides strain JFW-HI SEQ_128420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52254

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5208--5311
22
4.6
22
90
2
154
12
22
25
39
1.89
5217--5344
66
1.9
66
85
6
177
11
23
25
39
1.88
7567--7610
18
2.5
17
82
10
52
6
29
0
63
1.20
9721--9766
23
2.0
24
82
4
58
80
4
8
6
1.01
11361--11416
24
2.3
24
90
0
85
71
5
19
3
1.21
13359--13400
21
2.0
22
86
13
61
76
2
16
4
1.07
14987--15028
12
3.5
12
75
12
50
73
2
19
4
1.12
14981--15036
24
2.3
24
93
0
94
69
5
21
3
1.24
18890--19078
79
2.4
80
90
3
301
24
18
24
32
1.97
20712--20743
15
2.1
15
94
0
55
21
18
25
34
1.96
23123--23179
24
2.4
23
91
5
87
70
1
21
7
1.20
29190--29245
15
3.6
15
75
15
51
46
7
14
32
1.71
36626--36738
51
2.2
51
100
0
226
36
8
15
39
1.78
36626--36771
51
2.9
51
88
4
161
35
10
14
39
1.81
37083--37141
24
2.5
24
77
0
64
22
16
23
37
1.94
39728--39796
35
1.9
36
85
8
97
21
26
15
36
1.94
46322--46549
50
4.5
50
86
4
289
38
12
14
35
1.83
46322--46554
101
2.3
102
83
8
305
38
12
14
35
1.83

Tables:   1

The End!