Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013399.1 Kokia drynarioides strain JFW-HI SEQ_128424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26749

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
194--586
29
13.4
29
71
16
274
33
30
3
32
1.75
194--595
59
6.8
59
85
2
522
33
29
3
33
1.75
191--597
118
3.5
118
87
1
577
33
29
3
33
1.75
866--1052
96
1.9
96
81
6
227
32
18
11
36
1.87
6340--6431
9
9.4
10
72
13
75
68
1
3
27
1.12
6340--6445
10
11.0
9
68
12
50
66
1
3
27
1.19
6341--6431
19
4.7
20
78
8
98
68
1
3
27
1.12
6546--6596
10
5.7
9
80
17
52
72
0
3
23
1.01
6716--6775
29
2.0
30
81
9
70
41
1
0
56
1.09
6678--6771
30
3.2
29
77
12
79
36
1
1
61
1.10
9574--9614
20
2.1
19
90
4
64
46
0
0
53
1.00
9657--9705
20
2.7
18
77
22
57
51
4
2
42
1.32
12242--12272
9
3.4
9
95
0
53
35
12
16
35
1.87
12241--12279
9
4.3
9
90
0
51
43
10
12
33
1.77
15927--15964
18
2.1
18
90
9
60
23
10
15
50
1.75
17244--17352
33
3.3
33
81
10
125
32
23
11
32
1.91
19703--19771
6
12.2
6
73
17
67
44
0
2
52
1.16
19706--19755
17
2.9
17
90
0
73
42
0
4
54
1.19
19724--19767
23
2.0
22
90
4
70
45
0
4
50
1.22
20387--20427
11
3.6
11
84
15
57
70
0
0
29
0.87
21559--21597
4
9.5
4
88
5
60
76
0
23
0
0.78
21593--21646
7
8.3
7
80
15
71
57
0
42
0
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21589--21646
18
3.5
18
70
27
56
58
0
41
0
0.98
21784--21818
18
1.9
18
94
0
61
25
0
14
60
1.35
21991--22033
21
2.1
21
91
4
70
25
0
13
60
1.34
22748--22797
16
3.3
15
73
21
50
60
6
0
34
1.21
24094--24178
43
2.0
43
83
4
109
29
11
10
48
1.73
24746--24882
45
3.0
45
89
0
211
30
29
21
17
1.96
25139--25217
27
2.9
27
80
1
95
49
27
0
22
1.50
25155--25212
14
4.1
14
82
6
73
51
27
0
20
1.47
26194--26239
23
2.0
23
100
0
92
21
43
17
17
1.88

Tables:   1

The End!