Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013412.1 Kokia drynarioides strain JFW-HI SEQ_128437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  114756

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21098--21126
7
4.1
7
100
0
58
27
44
0
27
1.54
28231--28379
59
2.6
58
77
14
146
34
16
18
31
1.93
30059--30110
23
2.2
24
83
10
63
53
3
1
40
1.30
30129--30172
20
2.2
20
87
0
61
70
0
9
20
1.14
30224--30283
8
7.8
8
74
7
52
41
0
5
53
1.23
30224--30283
23
2.6
23
100
0
120
41
0
5
53
1.23
31903--31938
16
2.2
16
90
0
54
63
2
0
33
1.08
32636--32988
188
1.9
189
83
4
471
36
14
14
34
1.87
37330--37412
29
2.7
31
78
9
91
60
7
3
28
1.41
38044--38098
16
3.5
16
73
11
51
45
7
1
45
1.41
38473--38530
30
1.9
30
82
6
73
51
0
0
48
1.00
46254--46283
2
15.0
2
100
0
60
50
0
0
50
1.00
56688--56715
6
4.7
6
100
0
56
85
0
14
0
0.59
57328--57380
21
2.5
22
78
6
56
32
1
9
56
1.42
59331--59356
8
3.2
8
100
0
52
46
0
0
53
1.00
60376--60442
31
2.2
31
100
0
134
58
0
2
38
1.14
62999--63039
21
2.0
21
85
9
57
31
0
0
68
0.90
63507--63545
20
2.0
20
84
0
51
25
20
7
46
1.77
68632--69089
223
2.0
224
94
1
812
42
18
12
26
1.86
70875--70912
20
1.9
20
88
0
58
39
13
15
31
1.86
80080--80135
8
7.2
8
88
8
53
50
10
0
39
1.37
80100--80135
2
18.0
2
94
0
63
50
2
0
47
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88574--88631
29
2.0
29
82
3
71
29
5
3
62
1.33
90043--90237
101
1.9
101
86
4
277
34
5
8
51
1.55
103069--103142
30
2.5
31
76
12
75
47
2
2
47
1.30
104787--104819
2
17.0
2
87
6
50
51
3
0
45
1.16
110251--110295
17
2.7
18
73
13
51
40
0
0
60
0.97
113631--113699
31
2.2
31
92
5
113
20
5
5
68
1.32

Tables:   1

The End!