Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013415.1 Kokia drynarioides strain JFW-HI SEQ_128440, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  126813

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
129--248
31
4.0
31
66
6
84
45
13
17
24
1.84
129--319
90
2.1
90
81
7
228
48
13
14
24
1.79
182--319
31
4.5
31
71
15
101
50
12
13
24
1.75
4688--4738
22
2.3
22
78
18
61
52
17
19
9
1.72
7753--7790
20
1.9
20
84
10
51
55
5
2
36
1.37
8360--8406
22
2.1
23
88
7
71
55
0
0
44
0.99
16236--16289
27
2.0
27
82
7
65
14
5
9
70
1.31
23291--23324
16
2.1
16
88
0
50
55
0
0
44
0.99
31449--31492
20
2.2
20
100
0
88
45
4
0
50
1.22
31388--31553
81
2.0
81
98
0
323
36
16
4
42
1.69
39093--39126
15
2.3
15
94
0
59
73
2
0
23
0.97
43448--43492
21
2.2
20
84
4
54
33
22
15
28
1.95
48700--48929
115
2.0
115
100
0
460
32
6
14
46
1.72
51933--52000
27
2.5
27
81
11
68
38
2
0
58
1.13
51963--52005
11
3.8
11
80
17
52
32
2
0
65
1.06
54474--54541
24
2.8
24
93
0
118
54
11
10
23
1.67
56489--56539
24
2.1
24
92
0
84
54
11
11
21
1.68
60363--60393
16
1.9
16
93
0
53
74
0
0
25
0.82
65823--65858
6
6.0
6
100
0
72
33
50
0
16
1.46
67960--68016
15
3.5
15
71
17
51
50
1
1
45
1.22
69673--69718
25
1.9
23
86
8
65
34
0
19
45
1.51
75258--75341
42
2.0
42
100
0
168
57
16
9
16
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76883--76937
27
2.0
27
89
0
83
36
23
20
20
1.95
80428--80562
68
2.0
67
85
7
184
20
16
22
40
1.91
80529--80601
38
1.9
37
91
2
119
26
12
24
36
1.91
85127--85223
40
2.4
39
81
10
108
44
17
17
20
1.87
85240--85552
41
7.7
41
81
5
337
31
23
23
21
1.98
85240--85587
123
2.8
123
78
5
373
32
22
23
21
1.98
86358--86405
25
1.9
25
91
0
78
35
6
18
39
1.76
89693--89876
43
4.3
43
80
2
192
22
18
29
29
1.97
91850--91900
24
2.0
26
85
7
70
45
0
1
52
1.12
105047--105071
13
1.9
13
100
0
50
32
12
0
56
1.36
105060--105097
18
2.1
18
90
0
58
34
2
5
57
1.35
105246--105280
2
17.5
2
93
0
61
51
2
0
45
1.16
105141--105372
125
1.9
125
99
0
455
34
14
2
47
1.58
106592--106635
23
2.0
22
86
8
63
18
6
22
52
1.69
107349--107500
71
2.1
71
92
0
250
34
22
21
22
1.97
111262--111498
41
5.8
41
76
6
149
20
24
16
39
1.92
115597--115829
96
2.4
96
83
2
272
45
12
22
19
1.83
115692--116810
324
3.5
323
84
2
1420
44
11
22
20
1.84
116668--116899
96
2.4
96
81
3
270
46
11
21
19
1.81
116347--118746
420
5.7
419
87
2
3121
44
12
22
20
1.84
117083--117318
95
2.5
96
87
1
366
43
12
24
19
1.85
117508--117739
96
2.4
96
89
1
358
46
11
22
19
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
117925--118166
95
2.5
96
89
1
369
45
13
24
16
1.83
118344--118572
96
2.4
95
86
2
311
44
11
23
19
1.83
121961--122026
21
3.5
18
76
15
71
40
16
7
34
1.77

Tables:   1

The End!