Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013426.1 Kokia drynarioides strain JFW-HI SEQ_128452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  208157

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7964--8032
26
2.7
26
76
13
79
30
24
20
24
1.99
24830--25122
51
5.7
51
91
0
451
30
22
14
32
1.94
34149--34179
15
2.0
16
93
6
55
77
0
22
0
0.77
38881--38935
26
2.1
26
89
0
83
25
20
23
30
1.98
39732--39762
16
1.9
16
93
0
53
22
16
0
61
1.34
52359--52409
21
2.4
21
87
12
70
29
33
11
25
1.91
53517--54045
262
2.0
260
93
1
907
33
16
9
40
1.81
55863--55903
21
1.9
22
85
5
57
26
24
17
31
1.97
56077--56123
23
2.1
22
84
11
60
12
6
12
68
1.39
60559--60592
5
6.8
5
90
9
52
82
0
17
0
0.67
60949--60989
21
2.0
21
90
0
64
24
14
14
46
1.82
70322--70375
23
2.3
22
79
17
56
25
7
5
61
1.45
89410--89490
3
27.7
3
81
16
91
69
0
30
0
0.89
89411--89488
22
3.5
22
81
13
81
70
0
29
0
0.87
102064--102108
24
2.0
23
83
16
58
15
4
15
64
1.44
102981--103009
3
9.7
3
100
0
58
65
0
34
0
0.93
106174--106215
21
2.0
21
85
4
57
40
7
4
47
1.52
113279--113323
22
2.0
22
100
0
90
28
17
26
26
1.98
147772--147806
18
1.9
18
88
11
54
51
14
5
28
1.65
150349--150378
14
2.2
14
94
5
53
43
10
16
30
1.81
157801--157849
25
2.0
25
100
0
98
28
20
26
24
1.99
172590--173009
38
11.2
37
76
10
367
28
18
14
39
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
172590--173005
74
5.6
72
77
7
363
27
18
14
39
1.89
172590--173020
147
2.9
143
78
9
434
28
18
14
39
1.89
174216--174243
14
2.0
14
100
0
56
28
0
0
71
0.86
178564--178614
21
2.5
19
79
17
57
29
11
23
35
1.90
184724--184776
24
2.3
24
84
9
67
5
0
16
77
0.96
184773--184812
17
2.4
17
83
8
55
12
5
10
72
1.26
184819--184861
22
1.9
23
81
13
54
11
6
16
65
1.46
184855--184905
12
4.3
12
77
5
59
11
5
13
68
1.37
190093--190155
24
2.7
23
78
4
72
23
23
4
47
1.70
194116--194187
36
2.0
36
91
0
117
36
12
26
25
1.91
194131--194216
36
2.4
36
90
3
129
38
11
26
23
1.89
199246--199290
17
2.6
17
85
0
63
44
17
20
17
1.87
204429--204519
34
2.7
34
81
3
94
39
19
21
18
1.92
204541--204580
20
2.0
20
100
0
80
25
15
40
20
1.90

Tables:   1

The End!