Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013435.1 Kokia drynarioides strain JFW-HI SEQ_128461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  109236

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2306--2366
28
2.1
29
85
8
81
26
8
29
36
1.85
2412--2696
59
4.9
59
88
3
371
31
3
29
34
1.75
2408--2700
29
10.1
29
80
7
294
31
3
31
34
1.74
4348--4384
16
2.3
16
85
0
56
18
10
27
43
1.83
4418--4479
6
10.8
6
72
16
51
54
3
0
41
1.16
4420--4482
17
3.8
16
89
4
81
53
3
0
42
1.16
6205--6250
22
2.0
23
91
4
76
23
17
2
56
1.52
11556--11601
17
2.5
19
80
16
53
41
8
0
50
1.33
11561--11601
18
2.3
18
87
8
57
36
9
0
53
1.34
17744--17775
3
11.0
3
93
6
57
68
0
0
31
0.90
19505--19570
35
1.9
35
84
6
91
57
1
0
40
1.08
29386--29413
2
14.0
2
100
0
56
50
0
0
50
1.00
30179--30228
26
1.9
26
91
0
82
18
12
16
54
1.72
32842--32915
22
3.5
20
78
7
76
6
4
20
68
1.29
32906--32930
12
2.1
12
100
0
50
8
0
24
68
1.16
32924--33009
24
3.7
23
75
7
66
10
10
12
66
1.45
33004--33028
12
2.1
12
100
0
50
8
0
24
68
1.16
32924--33021
24
4.1
23
74
11
65
10
9
14
66
1.45
46903--46945
18
2.5
17
76
3
50
34
0
2
62
1.08
49213--49280
26
2.6
26
88
0
91
30
16
16
36
1.90
49615--49700
26
3.3
26
73
0
91
43
24
11
20
1.85
49615--49716
52
2.0
52
90
0
159
42
24
10
22
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49596--49711
26
4.5
26
70
6
83
41
22
11
25
1.86
54089--54435
61
5.6
60
77
13
357
30
9
0
59
1.28
54077--54451
123
3.0
124
93
3
648
32
8
0
58
1.28
58123--58151
2
14.5
2
100
0
58
48
0
0
51
1.00
60943--60984
20
2.0
21
90
4
68
54
9
21
14
1.68
62556--62627
29
2.5
29
81
2
83
25
11
25
38
1.88
66914--66959
25
1.9
23
91
8
74
47
0
0
52
1.00
71922--71985
28
2.3
28
88
0
101
32
23
12
31
1.92
72224--72317
28
3.2
28
80
7
91
36
23
14
25
1.93
71753--72429
311
2.2
311
89
2
1004
31
22
16
29
1.96
82029--82078
20
2.5
20
76
3
55
68
4
4
24
1.24
98909--98957
14
3.1
16
80
17
57
46
2
0
51
1.12
106615--106681
25
2.7
25
88
0
98
28
19
17
34
1.95
108710--108848
31
4.5
31
73
15
101
23
16
14
45
1.84
108710--108903
90
2.1
91
81
2
230
22
16
15
45
1.84

Tables:   1

The End!