Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013443.1 Kokia drynarioides strain JFW-HI SEQ_128469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49250

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
190--242
26
1.9
29
85
11
76
35
3
3
56
1.35
1665--1691
2
13.5
2
100
0
54
48
0
0
51
1.00
15204--15368
81
2.0
81
98
0
321
35
22
21
20
1.96
18458--18506
24
2.0
26
84
8
66
51
2
4
42
1.32
19486--19533
24
2.0
24
87
0
69
35
31
12
20
1.90
21312--21357
17
2.7
17
96
0
83
23
10
0
65
1.24
21390--21422
16
2.0
17
88
5
50
45
6
0
48
1.27
22573--22766
97
2.0
97
82
4
239
37
14
17
30
1.90
23123--23491
30
12.5
29
76
13
219
35
4
24
35
1.75
23123--23436
58
5.3
57
79
13
243
35
4
25
35
1.76
23160--23441
30
9.5
28
81
11
248
34
4
24
36
1.75
23123--23436
89
3.6
85
80
12
289
35
4
25
35
1.76
23123--23500
59
6.4
58
79
12
287
35
4
24
35
1.75
25124--25161
15
2.5
15
83
8
51
18
10
28
42
1.83
25209--25321
17
6.4
17
81
10
111
53
3
0
42
1.24
25263--25302
20
2.0
20
100
0
80
55
5
0
40
1.22
27713--27764
22
2.5
20
76
11
59
38
0
1
59
1.08
28943--28993
21
2.4
21
83
9
59
41
5
3
49
1.45
32039--32083
6
7.5
6
89
0
63
24
28
0
46
1.53
46151--46210
15
4.2
15
77
8
54
65
1
1
31
1.13

Tables:   1

The End!