Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013452.1 Kokia drynarioides strain JFW-HI SEQ_128478, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89534

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5836--5897
30
2.0
31
87
3
90
20
41
1
35
1.62
5842--5907
30
2.2
30
81
8
71
19
50
1
28
1.57
15117--15149
4
8.2
4
100
0
66
51
24
0
24
1.48
16950--16998
18
2.6
17
84
15
53
44
4
0
51
1.20
17905--17946
21
2.0
22
90
4
68
50
0
0
50
1.00
18777--18851
31
2.4
31
88
4
107
44
4
0
52
1.20
21885--21949
30
2.2
30
91
0
103
23
3
15
58
1.51
27364--27393
9
3.3
9
95
0
51
56
0
3
40
1.16
28689--28727
20
1.9
21
84
5
53
35
5
2
56
1.35
28671--28813
50
2.9
49
77
16
177
30
2
3
62
1.26
29437--29505
22
3.2
22
85
4
104
5
2
18
72
1.18
29437--29545
21
4.9
23
72
15
95
5
4
19
70
1.25
29454--29529
11
6.9
11
76
8
66
3
3
21
71
1.19
29437--29545
43
2.4
47
86
6
145
5
4
19
70
1.25
29552--29609
23
2.5
24
82
2
64
13
3
17
65
1.40
29575--29614
12
3.3
12
89
0
62
15
2
12
70
1.28
33544--33577
17
2.0
17
100
0
68
17
29
0
52
1.45
41634--41666
15
2.2
15
89
10
50
66
0
0
33
0.92
57362--57449
31
2.8
31
81
3
88
32
19
6
40
1.78
61373--61407
18
1.9
18
88
0
52
40
2
0
57
1.14
64508--64557
23
2.1
24
92
3
84
56
8
12
24
1.62
69088--69139
19
2.8
18
77
13
52
26
17
1
53
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70788--70827
3
13.3
3
100
0
80
67
0
0
32
0.91
77418--77464
24
2.0
24
86
0
67
44
8
6
40
1.60
83960--83987
2
14.0
2
100
0
56
50
0
0
50
1.00
85025--85119
31
3.0
31
75
13
86
44
4
2
49
1.33
85096--85137
17
2.3
18
88
8
59
45
7
0
47
1.30
87100--87131
17
1.9
17
93
6
57
43
0
6
50
1.27
87106--87140
17
2.0
17
88
5
52
45
2
5
45
1.41
88599--88752
76
2.0
76
100
0
308
29
27
15
27
1.96

Tables:   1

The End!