Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013461.1 Kokia drynarioides strain JFW-HI SEQ_128487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46827

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
455--490
16
2.3
16
90
4
56
16
8
27
47
1.75
534--602
34
2.1
33
83
8
86
52
5
0
42
1.25
534--593
17
3.5
17
84
6
77
55
3
0
41
1.16
969--1440
206
2.3
207
92
1
777
19
20
21
38
1.94
1907--1963
29
2.0
29
96
0
105
63
10
15
10
1.52
13270--13502
29
8.0
28
76
10
193
32
4
30
33
1.78
13275--13503
59
3.9
60
82
7
263
32
4
28
33
1.78
15280--15320
16
2.6
15
85
11
55
21
14
24
39
1.91
15354--15432
6
13.8
6
73
15
69
55
1
0
43
1.07
15356--15432
17
4.5
17
90
4
120
57
1
0
41
1.07
15809--16267
207
2.2
208
93
0
787
20
20
20
37
1.95
16774--17325
278
2.0
278
94
0
960
25
21
14
38
1.92
17329--17488
29
5.4
28
76
10
142
31
32
3
32
1.76
17341--17451
30
3.7
29
80
13
127
33
30
2
33
1.72
17310--17481
60
2.8
60
88
2
229
33
29
4
33
1.76
19660--19882
111
2.0
112
83
6
283
24
12
11
51
1.72
19771--20592
215
3.8
215
77
7
800
31
9
13
45
1.75
21093--23513
216
11.1
216
76
8
1490
31
10
12
45
1.76
21095--23513
434
5.5
432
77
6
2089
31
10
12
45
1.76
24577--24610
17
2.0
17
94
0
59
52
14
17
14
1.74
27774--28644
50
17.4
50
66
14
321
36
19
19
24
1.95
27759--28676
100
9.2
99
85
3
1021
37
19
19
24
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27759--28676
300
3.1
294
84
5
1151
37
19
19
24
1.94
29148--29184
4
9.0
4
94
5
65
24
0
0
75
0.80
29139--29190
13
3.9
13
90
10
79
23
3
0
73
1.00
29326--29382
29
1.9
30
85
3
80
28
17
0
54
1.43
31412--31691
108
2.6
107
87
4
382
33
12
13
40
1.82
32366--32424
19
3.1
19
82
7
57
23
3
6
66
1.32
34321--34383
31
2.0
31
87
0
90
33
12
6
47
1.67
35843--35901
29
2.0
30
86
3
84
52
15
3
28
1.58
36036--36290
76
3.4
76
80
9
288
40
10
10
38
1.74
36687--36916
114
2.0
114
99
0
451
27
29
12
30
1.93
39266--39404
71
2.0
70
81
9
167
62
11
6
19
1.50
40896--40925
14
2.1
14
93
0
51
50
30
0
20
1.49
40899--40938
21
1.9
21
85
10
55
52
27
0
20
1.46
41413--41466
20
2.7
20
85
0
72
29
33
9
27
1.88
41674--41734
20
3.1
21
72
11
58
34
18
13
34
1.89
44327--44391
33
2.0
34
90
6
107
35
4
21
38
1.74
45882--46060
60
3.0
59
91
1
277
30
12
8
48
1.71

Tables:   1

The End!