Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013484.1 Kokia drynarioides strain JFW-HI SEQ_128510, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  135263

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1372--1450
37
2.1
38
83
2
97
22
18
25
32
1.97
6692--6734
20
2.2
19
83
4
50
4
11
2
81
0.93
6704--6735
7
4.7
7
96
3
57
0
9
0
90
0.45
11910--11935
3
8.7
3
100
0
52
65
0
0
34
0.93
33865--34093
114
2.0
114
98
0
440
38
18
14
27
1.90
36532--36559
2
14.0
2
100
0
56
0
50
0
50
1.00
45780--45965
52
3.6
51
86
2
239
25
13
24
37
1.92
45780--45965
103
1.8
103
83
2
248
25
13
24
37
1.92
52790--52952
82
2.0
82
95
0
290
26
10
24
38
1.87
72612--72662
18
2.9
18
77
13
61
64
0
0
35
0.94
72612--72670
21
2.9
21
73
14
61
64
0
0
35
0.94
76668--76866
30
6.7
30
80
10
205
33
5
29
32
1.79
76638--76871
89
2.6
88
84
8
271
32
5
30
31
1.81
76668--76850
59
3.1
60
81
7
198
33
4
30
31
1.77
77997--78049
3
17.3
3
81
11
54
39
1
0
58
1.09
78769--78823
6
9.5
6
77
15
53
49
1
0
49
1.11
78775--78820
17
2.7
17
93
0
74
54
2
0
43
1.12
79498--79531
17
1.9
18
88
5
52
50
0
0
50
1.00
79603--79656
27
2.0
26
89
3
81
27
1
24
46
1.63
80595--80641
14
3.3
14
79
8
51
53
2
0
44
1.12
87856--87888
12
2.8
12
90
0
57
21
24
0
54
1.45
98538--98597
23
2.6
23
71
7
59
41
16
8
33
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
100133--100204
31
2.3
31
77
13
85
47
6
15
30
1.72
100485--100986
167
3.0
167
98
0
968
30
11
20
37
1.88
105865--105924
28
2.1
28
84
6
77
31
5
3
60
1.35
106341--106382
21
2.0
21
81
9
50
42
0
0
57
0.99
106345--106412
27
2.4
27
80
9
66
50
0
0
50
1.00
120613--120697
34
2.5
33
77
9
82
48
0
3
48
1.18
120639--120682
15
2.7
15
83
16
52
45
0
6
47
1.29
120639--120695
16
3.4
17
79
18
66
45
0
5
49
1.24
120612--120696
17
4.9
17
76
15
59
49
0
3
47
1.18
130756--130799
23
1.9
23
85
0
61
13
6
2
77
1.07
133632--134054
29
14.3
29
75
11
308
39
3
24
33
1.71
133591--134144
59
9.4
58
79
8
487
38
3
23
33
1.72
133661--134148
30
16.6
28
71
13
218
38
3
25
32
1.73
135239--135263
3
8.3
3
100
0
50
32
0
0
68
0.90

Tables:   1

The End!