Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013503.1 Kokia drynarioides strain JFW-HI SEQ_128529, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97835

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4000--4067
33
2.1
33
100
0
136
26
23
14
35
1.94
5924--6045
23
5.2
23
85
5
138
10
26
22
40
1.86
11743--11863
23
5.3
23
84
4
154
42
20
23
13
1.88
13865--13918
20
2.7
20
82
5
56
29
9
31
29
1.88
20258--20360
43
2.4
43
83
0
125
31
26
8
33
1.87
20584--20626
21
2.0
21
82
8
52
37
13
2
46
1.57
27154--27213
19
3.2
19
73
4
59
63
1
3
31
1.20
34413--34450
8
4.6
8
90
3
58
34
0
2
63
1.09
35394--35529
73
1.9
72
82
1
173
39
4
11
44
1.61
35529--35574
23
2.0
22
83
4
56
60
2
2
34
1.21
36875--36904
6
5.0
6
95
0
51
70
0
13
16
1.18
39072--39118
19
2.5
19
75
6
51
61
6
0
31
1.21
46321--46362
21
2.0
20
86
4
57
42
14
0
42
1.45
46338--46393
18
2.9
20
70
20
55
42
14
1
41
1.56
46662--46700
20
2.0
20
90
5
62
35
20
5
38
1.75
46745--46833
20
4.5
19
77
14
65
41
16
0
41
1.49
49547--49662
36
3.3
34
72
13
92
36
18
15
29
1.92
49486--49660
71
2.5
71
79
3
199
36
22
14
26
1.93
52289--52347
31
1.9
31
86
3
84
45
5
5
44
1.47
57358--57452
40
2.4
40
89
1
147
32
18
18
29
1.96
62296--62394
39
2.5
40
90
3
155
31
18
19
31
1.95
65474--65565
28
3.1
28
66
22
71
42
4
4
48
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65475--65578
31
3.4
31
72
15
108
42
3
3
50
1.39
70190--70239
25
2.0
26
84
11
68
28
0
2
70
0.99
70195--70282
25
3.5
25
69
17
67
34
0
2
63
1.07
70348--70390
19
2.3
19
83
0
59
25
4
4
65
1.32
72530--72901
40
9.4
40
71
11
239
27
15
24
32
1.96
72549--72915
39
9.3
39
69
15
220
26
17
23
32
1.96
72492--72919
79
5.4
79
83
5
458
27
17
23
32
1.96
72491--72919
158
2.7
157
86
3
549
27
17
23
31
1.96
73821--73900
37
2.1
37
86
2
106
17
22
13
46
1.83
78901--78973
31
2.4
31
86
4
96
43
10
15
30
1.80
79982--80009
11
2.5
11
100
0
56
50
17
17
14
1.79
81450--81613
63
2.6
63
94
0
283
50
5
0
43
1.25
82450--82481
3
10.7
3
93
0
55
68
0
28
3
1.04
82521--82658
3
46.0
3
76
11
104
57
0
41
0
1.09
82523--82657
39
3.5
37
83
11
155
57
0
41
0
1.09
82946--83045
47
2.1
47
85
3
130
29
8
23
40
1.83
83084--83184
42
2.4
41
85
1
139
18
11
11
57
1.64
83084--83182
21
4.7
21
71
9
76
19
11
12
57
1.64
83393--83497
42
2.5
42
87
0
138
21
11
12
54
1.69
83428--83542
21
5.6
20
72
9
97
20
9
12
57
1.63
90996--91053
29
2.0
29
86
0
80
41
3
3
51
1.35
92173--92229
28
2.0
28
86
6
80
50
1
3
43
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92831--92916
4
21.2
4
73
11
68
66
0
29
4
1.12
92830--92903
21
3.5
22
85
10
93
66
0
29
4
1.10
92836--92903
20
3.5
20
86
9
97
67
0
29
2
1.05
92831--92916
20
4.5
19
81
8
86
66
0
29
4
1.12
96042--96177
45
3.0
44
86
2
182
22
22
24
30
1.99

Tables:   1

The End!