Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01013527.1 Kokia drynarioides strain JFW-HI SEQ_128553, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 7398
ACGTcount: A:0.36, C:0.17, G:0.13, T:0.34


Found at i:2394 original size:22 final size:22

Alignment explanation


    Indices: 2366--2411  Score: 92
    Period size: 22  Copynumber: 2.1  Consensus size: 22

       2356 AGATACCAAA

                                  
       2366 ATACTAACCAAATTTCCTTTTG
          1 ATACTAACCAAATTTCCTTTTG

                                  
       2388 ATACTAACCAAATTTCCTTTTG
          1 ATACTAACCAAATTTCCTTTTG

              
       2410 AT
          1 AT

       2412 TTCACAAAGG


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  22   24  1.00

ACGTcount: A:0.33, C:0.22, G:0.04, T:0.41


Consensus pattern (22 bp):   
ATACTAACCAAATTTCCTTTTG
Done.