Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013528.1 Kokia drynarioides strain JFW-HI SEQ_128554, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68333

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--169
17
2.2
17
86
4
51
15
15
12
56
1.68
3173--3220
18
2.7
18
83
0
60
47
6
35
10
1.63
3176--3232
18
3.2
18
77
5
53
45
7
31
15
1.73
6737--6775
13
2.8
13
88
7
51
38
2
10
48
1.51
8320--8377
19
2.9
19
76
5
62
20
3
5
70
1.21
8300--8479
100
1.8
100
82
11
235
22
6
6
65
1.37
9712--9772
32
1.9
32
93
0
104
21
4
6
67
1.33
15791--16106
175
1.8
174
79
10
376
35
15
19
28
1.93
17830--17859
16
1.9
15
93
6
51
0
13
0
86
0.57
23702--23788
24
3.6
23
69
21
70
10
19
1
68
1.24
23753--23801
16
3.2
15
77
11
55
4
20
0
75
0.96
23750--23802
18
3.2
16
81
7
54
3
18
0
77
0.92
24348--24389
17
2.4
18
76
15
52
57
16
11
14
1.66
26978--27006
14
2.1
14
100
0
58
58
13
13
13
1.63
35044--35078
4
8.8
4
87
0
52
51
0
25
22
1.48
38535--38575
3
13.7
3
100
0
82
31
0
0
68
0.90
39294--39337
21
2.2
20
88
12
63
70
0
9
20
1.14
39952--40168
115
1.9
114
89
6
341
45
8
2
43
1.46
40061--40113
21
2.6
21
78
3
54
45
5
1
47
1.37
40130--40177
24
2.0
25
87
4
71
41
10
0
47
1.37
41004--41399
42
9.5
41
84
3
445
38
21
17
22
1.93
41813--41852
19
2.2
19
90
4
64
0
12
10
77
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43566--43611
16
2.9
16
81
9
51
67
4
8
19
1.35
44295--44336
21
2.0
22
85
4
59
45
9
0
45
1.36
55964--55996
17
1.9
17
100
0
66
66
12
15
6
1.42

Tables:   1

The End!