Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013532.1 Kokia drynarioides strain JFW-HI SEQ_128558, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  123077

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
193--242
25
2.0
25
92
0
82
54
2
24
20
1.55
3565--3610
24
1.9
24
91
8
76
19
34
28
17
1.94
8443--8519
36
2.1
36
85
4
102
28
10
27
33
1.90
8927--9478
46
12.1
46
90
2
853
34
4
14
46
1.65
8927--9478
23
24.1
23
86
3
765
34
4
14
46
1.65
10810--10845
18
2.1
18
89
5
56
58
0
8
33
1.28
11707--11736
15
2.0
15
93
0
51
63
0
6
30
1.20
11725--11758
11
3.1
11
91
0
50
73
0
2
23
0.97
12163--12296
50
2.6
50
77
12
121
25
3
4
66
1.27
12273--12325
9
5.8
9
77
4
61
33
3
0
62
1.13
12163--12326
10
16.5
10
69
16
58
27
3
3
65
1.26
12235--12326
18
4.7
19
74
15
64
27
4
3
65
1.27
12274--12368
19
5.4
19
64
20
55
32
4
1
62
1.22
14308--14361
24
2.2
24
90
0
81
53
5
0
40
1.24
14785--14837
28
1.9
27
92
3
88
66
0
1
32
1.03
17534--17614
38
2.1
38
97
0
153
32
8
32
27
1.87
31169--31218
20
2.5
20
81
15
50
42
14
0
44
1.44
33731--33763
3
11.0
3
100
0
66
66
0
0
33
0.92
35664--35732
21
3.3
21
87
0
93
14
21
10
53
1.70
40299--40370
31
2.4
31
85
2
101
20
19
15
44
1.86
40655--40713
29
2.0
29
83
0
73
54
11
13
20
1.70
41782--41822
15
2.6
16
80
3
57
68
0
0
31
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52766--52839
20
3.7
20
90
0
85
27
10
33
28
1.90
55843--55891
19
2.5
20
83
12
66
26
8
38
26
1.84
58893--58938
21
2.2
21
92
0
74
52
4
26
17
1.63
59124--59158
18
1.9
18
88
0
52
62
0
37
0
0.95
65518--65636
58
2.1
58
96
0
220
41
8
16
33
1.79
65712--65753
17
2.4
18
77
18
52
38
4
14
42
1.66
69706--69761
22
2.5
22
94
0
94
25
8
32
33
1.87
71065--71135
22
3.2
22
79
0
88
30
19
14
35
1.91
73770--73819
21
2.4
21
93
0
82
56
14
6
24
1.60
74408--74437
13
2.4
13
94
5
53
46
6
6
40
1.56
92289--92443
49
3.2
49
73
11
156
38
16
27
18
1.92
92245--92577
98
3.4
98
83
1
382
39
17
23
19
1.91
92253--92522
97
2.8
98
86
0
281
39
17
24
19
1.92
92302--92523
49
4.6
49
68
12
120
39
17
23
19
1.92
106251--106276
2
13.0
2
100
0
52
50
0
0
50
1.00
109259--109315
21
2.8
20
92
7
96
28
3
21
47
1.67
109563--109590
3
9.3
3
100
0
56
32
0
0
67
0.91
109917--110009
44
2.1
45
97
2
179
21
4
8
65
1.38
110279--110316
20
1.9
19
89
5
58
34
10
5
50
1.59
110382--110411
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!