Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013533.1 Kokia drynarioides strain JFW-HI SEQ_128559, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11524

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3451--3512
28
2.2
28
88
5
90
30
9
25
33
1.88
3528--3807
29
9.6
29
68
19
156
37
4
25
32
1.76
3505--3815
59
5.3
58
85
6
385
36
4
26
32
1.76
3789--3846
30
1.9
30
82
6
73
37
5
20
36
1.75
4921--4962
20
2.0
22
90
9
70
52
0
0
47
1.00
4887--4959
29
2.4
31
93
4
123
46
1
0
52
1.09
4912--4968
20
3.0
20
74
23
59
47
1
0
50
1.11
6874--6943
26
2.7
25
73
8
68
65
12
0
21
1.25
7190--7254
6
10.8
6
72
18
55
40
4
0
55
1.21
7190--7253
17
3.6
18
88
12
96
39
4
0
56
1.20
9157--9456
30
10.1
28
73
12
208
37
24
3
35
1.71
9157--9539
59
6.5
59
76
6
312
36
24
3
35
1.74
9157--9444
118
2.4
119
85
4
393
38
23
3
34
1.71
9436--9531
29
3.3
29
73
13
97
34
27
6
32
1.82

Tables:   1

The End!