Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013549.1 Kokia drynarioides strain JFW-HI SEQ_128575, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  156092

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6323--6360
18
2.1
18
95
0
67
21
34
28
15
1.94
11224--11269
25
1.9
24
91
8
76
54
8
2
34
1.43
19833--20156
161
2.0
161
98
0
630
36
11
8
42
1.72
28116--28140
6
4.2
6
100
0
50
0
32
0
68
0.90
30417--30441
2
12.5
2
100
0
50
52
0
0
48
1.00
34517--34563
3
16.0
3
91
4
78
2
31
0
65
1.04
40450--40515
31
2.2
30
83
5
80
34
7
13
43
1.73
40703--40761
29
2.0
30
83
3
75
45
13
6
33
1.70
45328--45381
21
2.4
24
76
17
62
37
1
0
61
1.07
48056--48117
32
1.9
32
87
6
90
48
11
11
29
1.74
65161--65194
15
2.2
16
89
5
52
38
0
0
61
0.96
68894--68934
21
2.0
22
85
9
59
24
4
17
53
1.63
86238--86271
15
2.2
16
94
5
61
64
0
0
35
0.94
86606--86646
14
2.6
16
81
14
50
60
0
0
39
0.96
87555--87609
7
7.9
7
76
15
60
27
0
0
72
0.85
87534--87590
22
2.7
22
83
5
64
31
0
0
68
0.90
87556--87611
20
2.7
21
89
10
80
26
0
0
73
0.84
87533--87611
28
2.9
27
80
9
88
29
0
0
70
0.87
87560--87614
15
3.9
15
72
27
57
29
0
0
70
0.87
87680--87730
22
2.3
22
80
6
59
66
0
1
31
1.03
91045--91092
24
2.0
24
91
0
78
35
12
37
14
1.84
97316--97365
22
2.3
21
83
12
66
66
0
0
34
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97838--97880
22
2.0
23
86
9
63
32
9
4
53
1.53
108672--108745
37
2.0
38
86
2
105
9
25
1
63
1.33
109865--109896
6
5.3
6
100
0
64
18
34
0
46
1.49
118704--118729
2
13.0
2
100
0
52
50
50
0
0
1.00
137677--137754
32
2.5
32
80
13
92
50
0
2
47
1.15
147075--147120
22
2.1
22
91
0
74
52
0
2
45
1.13
156053--156092
4
9.8
4
89
5
62
72
0
27
0
0.85
156053--156085
17
1.9
17
100
0
66
75
0
24
0
0.80

Tables:   1

The End!