Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013552.1 Kokia drynarioides strain JFW-HI SEQ_128578, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60159

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
236--291
15
3.7
15
95
0
85
16
8
26
48
1.75
227--291
30
2.2
30
82
0
85
15
9
29
46
1.77
281--321
13
3.2
14
80
19
54
17
7
19
56
1.64
323--395
34
2.2
33
85
2
92
53
2
0
43
1.15
323--395
17
4.4
16
79
8
83
53
2
0
43
1.15
340--390
23
2.2
23
79
6
59
54
3
0
41
1.19
3020--3070
26
1.9
26
92
4
84
27
0
5
66
1.14
9328--9373
20
2.3
19
88
11
65
6
17
0
76
1.00
10746--10893
74
2.0
74
94
0
260
24
12
11
51
1.73
12436--12511
30
2.5
30
81
12
93
39
3
22
34
1.73
12436--12523
30
3.0
29
75
18
83
36
4
23
35
1.76
12554--12694
58
2.4
58
83
4
160
38
1
29
31
1.66
12555--12750
29
6.8
29
73
11
136
36
1
28
33
1.67
12555--12745
87
2.2
86
79
11
203
36
1
28
34
1.67
12709--12835
30
4.3
31
75
12
115
40
1
20
37
1.62
14422--14456
6
6.0
6
86
6
54
54
0
0
45
0.99
14419--14454
17
2.1
17
100
0
72
61
0
0
38
0.96
14958--14984
13
2.1
13
100
0
54
29
25
29
14
1.95
18158--18193
19
1.9
18
88
5
54
33
5
0
61
1.19
18292--18330
6
6.5
6
87
0
51
46
0
30
23
1.53
22889--23223
29
11.7
27
78
13
198
35
27
4
32
1.77
22920--23227
57
5.3
55
74
15
173
36
26
4
32
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23130--23390
135
1.9
136
79
6
289
31
24
8
35
1.86
23344--23579
29
8.3
29
73
5
158
32
27
8
32
1.86
23346--23567
57
3.9
58
78
4
202
31
27
8
32
1.87
23421--23587
57
2.9
57
78
5
178
32
26
8
32
1.86
23265--23576
114
2.7
113
78
9
319
32
26
8
32
1.87
23315--23579
29
9.3
29
71
8
150
33
26
8
32
1.86
27190--27244
25
2.3
23
90
9
83
40
0
7
52
1.29
28833--28928
41
2.3
41
87
0
129
37
26
5
31
1.78
31968--32008
18
2.3
18
87
4
57
34
9
4
51
1.56
32085--32114
7
4.3
7
95
0
51
43
3
26
26
1.70
34402--34452
20
2.5
20
87
6
66
27
5
0
66
1.14
48194--48218
13
1.9
13
100
0
50
52
16
0
32
1.44
49865--49894
14
2.1
14
93
0
51
53
6
13
26
1.64
50008--50033
11
2.4
11
100
0
52
11
34
7
46
1.69
51169--51255
43
2.0
43
97
0
165
17
19
11
51
1.75
54801--54934
56
2.4
56
85
1
187
41
16
17
25
1.89
55465--55531
22
3.0
22
75
0
71
35
13
19
31
1.90
55568--55620
18
2.6
22
68
22
60
37
16
15
30
1.90
56285--56348
31
2.1
29
83
11
76
35
9
7
46
1.65

Tables:   1

The End!