Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013560.1 Kokia drynarioides strain JFW-HI SEQ_128586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47762

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3900--3942
18
2.4
19
88
7
63
55
2
11
30
1.48
6430--6481
15
3.5
15
72
0
50
23
19
17
40
1.91
14218--14283
31
2.2
31
84
10
84
34
16
13
34
1.88
22193--22294
51
2.0
51
90
3
161
35
20
12
31
1.90
22871--22927
20
2.9
19
84
7
69
36
1
1
59
1.18
22809--22927
9
12.8
9
68
10
60
37
1
3
57
1.26
27703--27739
19
1.9
19
89
10
58
59
2
0
37
1.12
27788--27837
24
2.1
24
88
7
75
66
0
0
34
0.92
30306--30470
55
3.0
55
81
5
165
53
12
6
26
1.63
30720--30768
6
8.3
6
84
4
55
18
22
0
59
1.38
30718--30776
11
5.2
11
75
15
57
22
23
0
54
1.45
30716--30769
17
3.1
17
82
12
74
18
25
0
55
1.43
30716--30773
23
2.5
22
81
13
64
20
24
0
55
1.44
30718--30776
17
3.4
16
82
13
73
22
23
0
54
1.45
31560--31598
20
2.0
20
85
10
53
43
2
2
51
1.29
31667--31716
26
1.9
26
84
8
66
32
6
4
58
1.41
37575--37608
17
2.0
17
88
0
50
85
8
0
5
0.75
42115--42256
30
4.8
30
78
11
141
33
20
6
39
1.78
42156--42294
59
2.3
59
80
9
149
37
19
5
38
1.74
42121--42288
30
5.7
30
72
16
109
35
20
5
38
1.77
44325--44363
12
3.2
12
77
0
51
48
17
17
15
1.81
47623--47678
20
2.7
19
81
15
58
78
0
16
5
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47622--47682
21
2.9
21
80
11
70
77
0
18
4
0.95

Tables:   1

The End!