Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013578.1 Kokia drynarioides strain JFW-HI SEQ_128604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67313

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1574--1602
14
2.0
15
93
6
51
27
24
0
48
1.51
9694--9759
33
2.0
33
100
0
132
42
9
12
36
1.74
14645--14696
25
2.1
25
100
0
104
36
3
7
51
1.49
15931--16308
14
26.9
14
68
15
113
17
0
29
53
1.47
15931--16278
7
50.1
7
70
18
67
17
0
29
52
1.47
16022--16099
28
2.8
28
94
3
131
16
0
34
48
1.47
16052--16251
21
9.5
21
69
14
101
19
0
29
50
1.52
16213--16301
45
2.0
44
84
6
117
21
0
24
53
1.45
16234--16321
26
3.4
25
80
9
88
19
0
25
55
1.43
16316--16420
19
5.6
19
64
15
56
21
1
27
48
1.61
16385--16437
25
2.1
25
89
3
79
20
0
24
54
1.44
16464--16518
12
4.3
13
80
11
51
20
0
25
54
1.44
16464--16500
14
2.8
14
88
8
51
18
0
27
54
1.44
16490--16636
19
7.4
19
73
15
127
19
0
26
53
1.50
16529--16614
12
6.8
12
68
15
57
19
0
26
53
1.45
16522--16602
26
3.1
26
83
0
99
19
0
27
53
1.46
16503--16602
45
2.2
45
81
10
116
20
0
26
54
1.45
16522--16642
26
4.5
26
72
15
77
20
0
26
52
1.52
17404--17449
20
2.3
20
80
0
56
36
13
17
32
1.88
27047--27076
15
1.9
16
93
6
53
26
6
6
60
1.47
28052--28084
15
2.1
17
88
11
52
63
0
3
33
1.10
28978--29336
178
2.0
179
91
0
585
30
10
21
37
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37133--37172
17
2.3
18
82
8
55
62
0
10
27
1.27
46489--46522
18
2.0
16
88
11
50
58
8
2
29
1.43
47235--47298
31
2.0
32
85
8
87
43
7
6
42
1.58
51994--52019
12
2.2
12
100
0
52
23
23
7
46
1.78
52448--52584
71
1.9
71
85
4
188
33
10
18
36
1.86
53058--53092
2
17.5
2
100
0
70
51
0
0
48
1.00
65259--65351
37
2.4
39
76
20
113
39
1
5
53
1.31
67122--67209
44
2.0
44
82
6
106
51
2
20
26
1.59

Tables:   1

The End!