Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013590.1 Kokia drynarioides strain JFW-HI SEQ_128617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51269

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
157--221
25
2.6
25
85
2
76
29
10
24
35
1.89
3915--4630
367
1.9
373
84
6
957
40
10
12
36
1.77
7416--7470
27
2.1
26
86
10
76
27
14
30
27
1.95
7630--7674
16
3.0
16
73
26
53
31
0
8
60
1.28
7846--7888
21
2.0
23
86
9
63
37
0
0
62
0.95
8737--8768
16
2.0
16
93
0
55
50
0
21
28
1.49
8862--8921
31
1.9
31
83
6
77
48
8
15
28
1.73
9136--9181
23
2.0
23
100
0
92
39
4
17
39
1.69
13388--13430
17
2.5
17
96
0
77
11
34
11
41
1.78
15093--15178
20
4.4
18
71
23
59
52
1
0
46
1.08
16217--16273
28
2.0
28
100
0
114
36
21
7
35
1.80
17826--18254
30
14.6
29
73
16
298
32
4
31
31
1.79
17826--18249
58
7.2
58
86
5
568
32
4
31
31
1.79
17819--18251
117
3.7
116
87
3
600
31
5
31
31
1.80
20163--20223
6
10.5
6
76
13
65
52
0
1
45
1.10
20165--20220
11
4.9
11
89
6
76
57
0
1
41
1.09
20147--20253
17
6.2
17
72
9
74
51
1
0
45
1.18
30479--30660
97
1.9
96
83
7
235
36
14
19
29
1.92
31034--31413
29
12.9
29
75
9
245
33
3
27
35
1.74
31047--31437
148
2.6
149
85
2
502
33
3
26
36
1.75
33250--33292
6
7.2
6
79
10
52
53
0
0
46
1.00
44937--44975
18
2.0
20
85
9
55
41
2
0
56
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45189--45229
16
2.4
18
88
8
59
48
0
2
48
1.14
45430--45480
15
3.5
15
76
15
61
54
5
5
33
1.48
45418--45480
29
2.1
29
82
5
72
57
6
4
31
1.45
48309--48349
19
2.2
19
86
0
55
39
0
0
60
0.96
48319--48348
15
2.1
14
93
6
51
33
0
0
66
0.92
48312--48359
23
2.0
24
88
4
71
41
0
0
58
0.98
48312--48353
8
5.2
8
81
18
52
40
0
0
59
0.97
48660--48713
25
2.1
27
86
6
76
59
3
0
37
1.15
48664--48719
25
2.2
24
81
12
67
58
5
0
35
1.21
48760--48831
22
3.3
22
72
1
56
66
6
6
19
1.38
48905--48949
17
2.6
18
82
3
56
37
4
2
55
1.32

Tables:   1

The End!