Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013601.1 Kokia drynarioides strain JFW-HI SEQ_128628, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  141783

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3936--4004
30
2.3
30
85
12
88
50
20
11
17
1.76
9488--9528
2
20.5
2
85
9
57
53
0
2
43
1.13
10869--10924
26
2.1
27
87
9
80
48
5
0
46
1.25
10877--10930
28
2.0
26
82
13
65
53
5
0
40
1.24
27280--27314
6
5.8
6
100
0
70
0
14
0
85
0.59
27293--27457
90
1.8
90
98
0
321
12
18
10
59
1.60
27714--27748
6
5.8
6
100
0
70
0
14
0
85
0.59
33479--33549
24
3.1
23
80
15
69
54
1
0
43
1.08
33479--33542
25
2.5
26
82
9
71
53
1
0
45
1.10
33504--33549
20
2.3
21
85
11
69
58
0
0
41
0.98
33496--33543
12
3.8
13
79
15
57
56
0
0
43
0.99
45411--45449
20
1.9
21
84
5
53
33
5
0
61
1.18
59818--59852
18
1.9
18
88
0
52
65
2
0
31
1.07
60739--60801
20
3.0
20
82
13
83
69
0
11
19
1.17
60789--60849
9
6.6
9
73
14
52
62
0
8
29
1.24
60788--60861
19
3.7
20
70
15
64
63
0
8
28
1.23
60903--60935
17
1.9
17
93
0
57
27
0
0
72
0.85
61070--61148
28
2.8
28
74
14
74
34
2
2
60
1.23
61080--61119
19
2.2
18
86
4
53
35
2
2
60
1.24
61081--61122
18
2.3
18
80
11
50
38
2
2
57
1.25
63839--63869
1
31.0
1
100
0
62
0
0
0
100
0.00
76571--76670
30
3.3
30
76
6
94
51
0
10
39
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79892--79938
20
2.4
21
86
10
64
59
8
0
31
1.27
85600--85633
18
1.9
18
88
5
52
50
0
0
50
1.00
91931--91961
2
15.5
2
100
0
62
48
0
0
51
1.00
92456--92637
91
2.0
91
97
0
346
27
20
23
28
1.99
96116--96190
38
2.0
37
97
0
132
57
2
16
22
1.51
96119--96199
38
2.1
38
88
0
117
64
1
14
18
1.35
105766--105804
16
2.3
18
82
13
55
66
10
0
23
1.22
120202--120283
29
2.8
29
79
3
83
46
4
10
37
1.61
125573--125665
38
2.3
38
82
14
100
51
5
3
39
1.41
125585--125665
38
2.1
40
86
9
114
54
6
2
37
1.39
130120--130252
61
2.2
61
95
1
241
30
21
9
39
1.84
138634--139671
215
4.9
215
89
3
1541
34
17
14
32
1.91

Tables:   1

The End!