Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013606.1 Kokia drynarioides strain JFW-HI SEQ_128633, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  122222

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
719--782
34
1.9
33
84
9
85
25
9
6
59
1.52
10499--10561
9
7.0
9
77
0
63
30
38
0
31
1.58
10499--10556
24
2.4
24
88
0
89
31
39
0
29
1.57
10499--10561
6
10.5
6
85
0
63
30
38
0
31
1.58
10505--10561
18
3.2
18
85
7
80
29
36
0
33
1.58
18296--18325
15
1.9
16
93
6
53
70
0
13
16
1.18
19130--19172
19
2.3
19
84
8
52
58
4
0
37
1.19
20394--20464
19
3.7
19
86
0
88
35
28
9
26
1.88
22569--22599
16
1.9
16
93
0
53
22
0
25
51
1.48
31515--31558
22
2.0
22
100
0
88
22
0
31
45
1.53
37072--37096
12
2.1
12
100
0
50
24
0
8
68
1.16
47104--47136
12
2.6
13
85
9
50
21
6
0
72
1.05
50313--50345
2
16.5
2
100
0
66
0
48
0
51
1.00
65426--65500
30
2.5
31
79
10
77
54
6
1
37
1.35
66009--66046
14
2.6
15
91
4
60
65
2
0
31
1.06
66455--66525
26
2.7
26
93
0
115
57
1
4
36
1.27
70960--71025
25
2.7
26
81
6
75
50
12
4
33
1.60
75215--75303
40
2.2
40
84
5
110
37
3
6
52
1.44
81358--81405
24
2.0
24
100
0
96
20
12
20
45
1.83
84347--84399
22
2.4
22
87
0
79
45
16
22
15
1.85
88407--88457
25
2.1
24
85
3
66
60
5
7
25
1.47
90786--90846
24
2.5
24
100
0
122
36
22
11
29
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91576--91970
52
7.6
52
90
0
601
35
24
13
26
1.92
97087--97122
16
2.2
17
90
5
56
47
8
8
36
1.64
102752--102776
12
2.1
12
100
0
50
8
40
0
52
1.31
104580--104710
21
6.6
19
71
15
88
30
0
3
64
1.16
104676--104734
12
5.1
12
73
20
54
25
0
3
71
1.02
104659--104734
23
3.5
22
80
10
77
26
0
5
68
1.11
116437--116515
25
3.2
25
87
1
115
44
15
29
11
1.81
116510--116564
22
2.4
23
85
11
78
45
23
20
10
1.82
120842--120926
27
3.2
27
80
8
95
36
16
28
18
1.93
120884--120926
13
3.3
13
81
9
52
30
18
30
20
1.97
120840--120920
13
6.0
14
74
7
69
37
16
28
18
1.92

Tables:   1

The End!