Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013621.1 Kokia drynarioides strain JFW-HI SEQ_128649, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31219

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
682--796
17
6.8
17
87
0
158
53
4
0
42
1.21
680--796
6
20.5
6
68
19
72
52
4
0
43
1.21
5663--5690
3
9.3
3
100
0
56
35
0
0
64
0.94
6185--6214
15
2.0
15
93
0
51
56
0
0
43
0.99
13670--13713
23
1.9
23
95
0
79
29
18
22
29
1.97
14540--14573
17
2.0
17
88
0
50
26
5
2
64
1.30
15041--15074
5
6.8
5
100
0
68
17
0
0
82
0.67
16912--16960
23
2.1
23
88
0
71
28
24
22
24
1.99
17795--17828
17
2.0
17
88
0
50
26
5
2
64
1.30
18618--18644
12
2.2
12
100
0
54
59
14
18
7
1.58
26032--26497
49
9.6
49
77
6
342
37
16
25
19
1.93
26032--26613
98
6.1
98
84
6
691
37
16
26
19
1.92
26034--26613
195
3.0
195
83
5
690
37
16
26
19
1.92
28204--28466
30
8.9
29
81
10
225
34
19
3
42
1.69
28278--28481
88
2.3
88
83
6
243
36
20
2
41
1.65
28204--28466
59
4.5
58
76
13
225
34
19
3
42
1.69
30160--30315
23
6.8
23
84
7
133
39
25
22
12
1.89
31045--31103
29
2.0
29
100
0
118
45
16
3
33
1.64

Tables:   1

The End!