Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013625.1 Kokia drynarioides strain JFW-HI SEQ_128653, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  117745

Tables:   1   

This is table  1  of  1  ( 63 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2879--2940
23
2.8
22
82
4
70
72
9
8
9
1.28
3657--3686
3
9.7
3
92
7
51
33
0
0
66
0.92
3948--3987
12
3.3
12
86
10
55
80
0
20
0
0.72
3956--3990
4
8.5
4
87
6
52
77
0
22
0
0.78
3956--3992
12
2.9
13
88
8
58
75
0
24
0
0.80
3986--4031
7
7.1
7
79
16
55
56
0
43
0
0.99
3944--4039
25
3.8
25
74
15
72
66
0
33
0
0.92
3987--4034
9
5.4
9
78
14
55
56
0
43
0
0.99
4612--4661
16
3.2
16
71
21
52
60
6
0
34
1.21
5939--6022
43
2.0
43
85
4
116
30
8
9
51
1.64
6861--6914
23
2.3
23
100
0
108
42
3
12
40
1.61
9837--9901
4
16.0
4
79
9
69
0
32
0
67
0.91
9837--9897
13
4.5
15
78
17
64
0
32
0
67
0.91
9835--9901
25
2.7
24
75
11
73
0
32
0
67
0.91
9837--9901
17
4.0
16
80
7
69
0
32
0
67
0.91
11378--11580
101
2.0
101
98
0
388
32
5
8
53
1.55
18607--18661
21
2.9
18
82
15
67
38
1
3
56
1.28
18610--18652
21
2.0
21
95
0
77
32
2
4
60
1.30
18655--18693
17
2.3
17
82
8
53
58
2
5
33
1.33
19969--20056
44
2.0
44
100
0
176
43
22
9
25
1.82
21161--21196
18
2.0
18
88
0
54
33
16
16
33
1.92
22794--22850
29
2.0
28
86
6
78
57
1
1
38
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23058--23169
19
5.7
20
66
13
70
38
2
1
57
1.24
23057--23125
20
3.6
19
69
9
59
37
2
2
56
1.29
23136--23179
20
2.2
20
88
4
63
34
0
0
65
0.93
23136--23198
19
3.3
18
79
14
56
30
0
1
68
0.99
23402--23569
88
1.9
87
80
7
198
37
8
15
38
1.79
23982--24061
37
2.1
38
81
6
92
52
1
3
42
1.27
25063--25251
95
2.0
95
94
0
333
29
21
22
27
1.99
43762--43819
31
1.9
31
86
10
84
43
8
5
43
1.57
44341--44436
51
2.0
47
83
8
120
52
11
11
25
1.71
47909--47948
21
1.9
21
89
0
62
32
20
10
37
1.85
48668--48782
37
3.1
38
88
5
164
34
26
21
16
1.95
49159--49303
71
2.1
70
96
1
263
44
11
20
24
1.83
50895--51029
36
3.8
36
91
0
216
34
15
25
25
1.95
51003--51057
28
2.0
28
88
0
83
30
14
29
25
1.95
52184--52271
36
2.4
37
90
1
133
42
27
13
17
1.86
57808--57868
30
2.0
30
100
0
122
14
19
22
42
1.88
58108--58133
13
2.0
13
100
0
52
15
23
23
38
1.92
59191--59241
3
17.3
3
93
4
86
29
0
1
68
1.00
60677--60720
22
1.9
24
86
9
65
40
11
2
45
1.53
70176--70206
6
5.2
6
100
0
62
32
0
51
16
1.44
81520--81633
32
3.6
30
74
5
84
48
6
13
32
1.67
81652--81691
16
2.4
17
87
4
64
62
2
0
35
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84198--84269
20
3.5
21
75
17
62
31
6
12
48
1.67
84231--84291
19
3.1
20
88
6
81
34
8
9
47
1.66
86525--86562
20
1.9
19
94
5
67
47
5
0
47
1.24
92396--92621
102
2.2
102
80
8
262
36
9
15
39
1.79
92656--92697
20
2.2
20
91
4
68
28
4
11
54
1.57
96225--96472
52
4.8
52
82
5
252
27
14
25
33
1.94
97067--97121
21
2.4
24
85
8
71
23
7
27
41
1.80
99674--99739
34
1.9
34
81
6
80
48
13
18
19
1.81
105999--106041
20
2.1
21
87
12
63
55
18
0
25
1.42
109048--109122
20
3.7
21
72
16
68
29
5
2
62
1.31
109046--109191
9
15.1
9
69
23
75
28
4
2
65
1.22
109051--109193
68
2.1
66
81
11
166
27
4
2
65
1.22
109046--109169
39
3.2
38
75
15
103
29
4
1
64
1.23
109119--109275
20
8.2
19
68
19
71
28
2
1
67
1.11
109046--109193
20
7.8
17
67
21
64
29
4
2
64
1.22
109088--109172
39
2.1
42
86
6
122
27
5
1
65
1.22
109177--109242
31
2.1
31
88
5
98
34
0
1
63
1.04
109230--109268
16
2.5
16
87
4
53
23
2
0
74
0.94
111128--111158
6
5.2
6
100
0
62
16
67
0
16
1.23

Tables:   1

The End!