Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013628.1 Kokia drynarioides strain JFW-HI SEQ_128656, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48281

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
580--610
16
1.9
16
93
0
53
51
0
0
48
1.00
5585--5831
59
4.2
60
79
8
204
40
2
23
34
1.69
5595--5831
89
2.7
86
79
9
253
39
2
23
34
1.68
5595--5830
30
8.0
30
78
9
225
39
2
23
34
1.68
6958--6986
14
2.0
15
93
6
51
13
13
13
58
1.63
8012--8505
39
12.7
39
70
6
162
24
19
30
24
1.98
8096--8503
78
5.2
78
79
0
422
24
19
31
24
1.98
8012--8268
117
2.2
117
81
5
288
26
21
28
22
1.99
16932--16965
15
2.3
15
90
5
52
35
14
11
38
1.83
20489--20759
30
9.2
29
75
8
192
38
3
25
33
1.73
20525--20715
59
3.2
58
81
7
199
36
3
25
35
1.72
24525--24614
45
2.0
45
100
0
180
51
8
6
33
1.59
25413--25642
32
7.1
32
88
2
307
40
17
16
25
1.91
25413--25642
65
3.6
64
89
0
334
40
17
16
25
1.91
28192--28242
22
2.3
22
75
0
57
43
9
1
45
1.48
32975--33008
12
2.8
12
86
0
50
52
20
14
11
1.73
35373--35412
18
2.1
20
86
9
57
35
0
10
55
1.34
35836--35877
7
6.0
7
100
0
84
42
42
0
14
1.45
36176--36264
12
6.7
14
66
21
50
41
2
0
56
1.12
36267--36308
13
2.9
14
80
13
50
54
0
0
45
0.99
36271--36307
16
2.3
16
86
13
58
59
0
0
40
0.97
36326--36396
15
4.6
15
70
16
56
47
1
2
47
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40981--41030
25
2.0
26
88
4
75
42
12
20
26
1.86
42169--42241
21
3.3
22
80
14
80
42
30
8
19
1.80
46883--47074
96
2.0
96
82
8
230
36
14
19
29
1.92
47401--47985
29
19.8
29
71
15
382
29
3
29
36
1.74
47397--47985
59
10.0
58
84
6
738
29
3
29
36
1.74

Tables:   1

The End!