Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01013630.1 Kokia drynarioides strain JFW-HI SEQ_128658, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4074
ACGTcount: A:0.33, C:0.15, G:0.16, T:0.37


Found at i:3482 original size:3 final size:3

Alignment explanation


    Indices: 3476--3508  Score: 66
    Period size: 3  Copynumber: 11.0  Consensus size: 3

       3466 GATTTGGTGG

                                                       
       3476 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA
          1 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA

       3509 ATGACAAGAA


Statistics
Matches: 30,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   30  1.00

ACGTcount: A:0.33, C:0.00, G:0.00, T:0.67


Consensus pattern (3 bp):   
TTA

Done.