Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013635.1 Kokia drynarioides strain JFW-HI SEQ_128663, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  122795

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3249--3313
25
2.7
23
82
13
78
12
26
21
40
1.88
3249--3313
23
2.8
24
84
13
82
12
26
21
40
1.88
3282--3348
35
1.9
35
87
0
98
17
19
19
43
1.89
3318--3364
23
2.0
23
87
0
67
10
19
21
48
1.78
21508--21549
21
2.0
21
85
4
57
35
0
2
61
1.09
22588--22633
22
2.1
22
88
8
67
39
28
13
19
1.89
23752--23811
28
2.1
28
81
9
68
20
13
16
50
1.78
24290--24330
21
2.0
21
85
0
55
56
7
4
31
1.48
34664--34835
83
2.1
83
100
0
344
40
16
12
30
1.86
35091--35119
6
4.8
6
100
0
58
13
17
34
34
1.89
37629--37670
21
2.0
20
86
4
57
50
9
2
38
1.48
39406--39581
88
2.0
88
98
0
343
17
14
32
35
1.90
40835--40908
35
2.2
34
88
7
114
47
9
6
36
1.63
41369--41430
22
2.7
22
80
12
63
46
3
6
43
1.45
44262--44289
2
14.0
2
100
0
56
0
50
0
50
1.00
52224--52257
18
1.9
17
88
5
50
55
2
2
38
1.30
54152--54177
3
8.7
3
100
0
52
69
0
0
30
0.89
61297--61337
20
2.1
19
86
4
55
17
9
0
73
1.09
63411--63474
26
2.5
26
89
2
94
39
18
28
14
1.90
71134--71170
2
18.5
2
94
0
65
51
0
45
2
1.15
73849--73891
10
4.1
10
79
8
50
58
4
0
37
1.19
73914--73953
21
2.0
20
85
5
53
65
2
2
30
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85293--85360
21
3.1
21
77
8
66
54
10
23
11
1.67
86384--86442
20
2.9
21
75
14
61
45
1
3
49
1.28
98405--98449
23
2.0
21
83
8
54
33
0
6
60
1.23
114195--114228
15
2.2
16
89
5
52
32
0
0
67
0.91
116242--116274
17
1.9
17
100
0
66
24
12
0
63
1.28

Tables:   1

The End!