Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013646.1 Kokia drynarioides strain JFW-HI SEQ_128674, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  104312

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
185--365
96
1.9
96
81
4
222
29
13
13
42
1.83
2581--2616
18
2.1
18
90
10
58
72
0
0
27
0.85
26808--26859
21
2.6
19
80
16
61
32
7
1
57
1.38
42097--42121
12
2.1
12
100
0
50
0
8
0
92
0.40
42436--42467
4
8.0
4
100
0
64
50
25
0
25
1.50
43250--43297
21
2.3
21
85
0
60
60
2
0
37
1.09
44739--44773
2
17.5
2
100
0
70
51
0
0
48
1.00
47261--47517
37
6.9
37
85
0
255
13
19
29
37
1.90
49041--49104
24
2.7
23
82
7
65
39
1
1
57
1.17
49620--49648
2
14.5
2
100
0
58
51
0
0
48
1.00
61351--61626
150
1.8
151
82
6
355
50
17
13
19
1.78
63306--63350
3
15.0
3
95
0
81
33
2
0
64
1.06
75052--75076
6
4.2
6
100
0
50
16
36
16
32
1.90
75989--76043
22
2.5
22
87
0
74
43
23
20
12
1.86
78765--79095
59
5.6
59
84
5
413
32
3
27
35
1.75
78749--79099
29
11.9
28
74
15
239
33
3
28
35
1.74
80134--80206
3
24.0
3
84
2
83
39
2
0
57
1.13
80792--80830
15
2.5
15
83
4
51
15
5
33
46
1.68
80899--80984
17
4.8
18
78
13
72
51
6
2
39
1.42
87951--88142
96
2.0
96
85
8
257
35
14
20
29
1.92
88431--88773
59
5.9
59
90
1
512
32
3
28
35
1.73
88440--88784
29
11.8
29
79
8
351
32
3
28
35
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89433--89523
30
3.0
30
77
0
101
12
42
24
20
1.86
90566--90613
17
2.8
17
87
0
69
52
2
2
43
1.24
90551--90598
24
2.0
24
88
4
71
54
2
0
43
1.12
99109--99263
30
5.3
27
74
16
107
32
19
3
44
1.67
99112--99230
59
2.0
60
84
11
156
36
17
1
44
1.59
102897--102931
6
5.8
6
100
0
70
34
65
0
0
0.93

Tables:   1

The End!