Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013655.1 Kokia drynarioides strain JFW-HI SEQ_128683, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28006

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
568--675
17
6.3
17
81
5
128
53
2
0
42
1.21
568--675
6
18.8
6
70
14
68
53
2
0
42
1.21
598--675
11
6.8
12
72
21
53
55
3
0
41
1.18
585--630
23
2.0
24
86
4
67
50
2
2
45
1.26
569--624
29
1.9
29
85
7
78
51
1
1
44
1.22
568--630
29
2.2
29
80
5
74
50
1
1
46
1.20
598--647
23
2.2
23
89
7
75
54
4
0
42
1.19
736--773
3
12.7
3
100
0
76
0
0
31
68
0.90
1363--1546
30
6.2
31
75
9
107
41
22
3
33
1.70
1609--1684
30
2.6
29
74
4
71
34
18
5
42
1.73
4596--4643
18
2.7
18
83
0
60
20
29
0
50
1.49
4596--4640
6
7.5
6
84
0
54
20
31
0
48
1.49
9580--9683
37
2.7
38
76
5
93
33
25
17
24
1.96
9767--9822
6
9.5
6
77
11
53
28
21
0
50
1.49
9786--9822
18
2.1
18
94
0
65
24
24
0
51
1.49
14076--14192
52
2.2
52
86
0
171
19
27
18
34
1.96
14101--14282
80
2.3
80
86
0
247
21
27
15
35
1.94
14101--14339
28
9.0
28
69
12
162
23
25
14
36
1.93
14261--14306
24
1.9
24
86
0
65
26
28
13
32
1.93
14093--14339
132
1.9
132
84
0
332
23
26
14
36
1.93
14181--14334
52
3.0
52
84
0
200
24
26
13
35
1.93
14183--14353
52
3.3
52
82
0
191
26
26
12
34
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20078--20127
21
2.4
21
86
0
64
32
8
26
34
1.85
20982--21016
17
2.0
18
88
5
54
48
25
0
25
1.51
21602--21682
31
2.8
27
78
17
74
35
6
6
51
1.52
21868--22073
60
3.5
60
88
6
312
36
8
7
48
1.61
27677--27758
12
6.9
12
68
17
55
39
14
13
32
1.85
27683--27747
23
2.8
23
82
11
80
40
16
12
30
1.86

Tables:   1

The End!