Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013656.1 Kokia drynarioides strain JFW-HI SEQ_128684, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  288284

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
904--948
6
7.8
6
82
9
58
55
2
0
42
1.12
901--958
17
3.5
16
90
6
89
60
1
0
37
1.07
904--958
11
4.9
11
82
8
58
58
1
0
40
1.09
3804--3878
25
3.0
25
86
7
98
22
17
25
34
1.96
3815--3898
26
3.3
25
83
8
98
20
20
28
30
1.97
5647--5835
51
3.6
51
85
5
229
29
24
14
31
1.94
6822--6879
28
2.1
28
100
0
116
31
18
0
50
1.48
9100--9166
31
2.2
31
100
0
134
46
5
5
41
1.53
9903--9953
26
2.0
26
88
3
77
21
15
29
33
1.94
11262--11309
21
2.3
21
85
0
60
39
22
12
25
1.89
12027--12077
24
2.1
24
81
0
57
29
25
19
25
1.99
17343--17403
24
2.5
24
83
0
77
24
14
13
47
1.80
20385--20427
14
3.3
12
78
15
50
25
0
4
69
1.07
34253--34495
120
2.0
120
99
0
477
23
31
12
32
1.92
39209--39261
19
3.1
18
76
13
58
52
0
0
47
1.00
40522--40555
2
17.0
2
100
0
68
50
0
0
50
1.00
42136--42179
18
2.5
17
81
7
52
45
2
0
52
1.13
47151--47210
25
2.4
25
91
0
93
36
8
15
40
1.77
55352--55389
19
2.0
19
94
0
67
34
26
13
26
1.93
83713--83959
123
2.0
123
86
0
341
23
38
10
27
1.88
86610--86775
42
4.0
42
80
4
192
27
21
24
26
1.99
89896--90092
42
4.8
42
82
1
229
25
24
19
29
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99412--99462
2
25.5
2
100
0
102
50
0
0
49
1.00
100219--100276
29
1.9
31
89
6
93
15
22
24
37
1.93
101573--101699
59
2.2
59
76
8
132
38
7
12
41
1.70
104498--104673
42
4.3
42
84
3
225
28
21
26
23
1.99
117568--117602
13
2.7
13
95
0
61
68
0
22
8
1.16
118700--118827
23
5.4
23
76
15
93
10
29
20
39
1.87
123964--124013
25
2.0
25
100
0
100
36
12
12
40
1.79
126006--126089
23
3.6
23
81
13
84
13
26
21
39
1.90
132520--132564
19
2.3
19
88
3
63
20
6
6
66
1.38
133132--133176
16
2.8
16
82
3
54
75
2
20
2
1.01
137185--137237
21
2.6
21
76
5
56
62
0
35
1
1.06
146661--146696
18
2.1
16
90
10
54
52
0
16
30
1.44
147238--147529
52
5.6
52
89
2
435
26
13
22
36
1.92
165455--165489
12
2.9
12
91
0
52
17
5
0
77
0.96
165455--165489
17
2.1
17
89
10
54
17
5
0
77
0.96
167837--167869
13
2.4
14
85
10
50
0
24
0
75
0.80
170816--170853
14
2.7
14
84
11
51
65
7
15
10
1.45
171616--171674
29
2.0
29
83
0
73
38
23
15
22
1.92
179108--179648
271
2.0
271
98
0
1037
27
20
21
29
1.98
183771--183805
12
2.9
12
91
0
52
17
5
0
77
0.96
183771--183805
17
2.1
17
89
10
54
17
5
0
77
0.96
191727--191753
9
3.0
9
100
0
54
44
11
22
22
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196570--196598
13
2.1
14
93
6
51
51
13
0
34
1.42
210678--210716
17
2.3
17
86
0
51
20
12
12
53
1.71
216213--216244
15
2.1
16
94
5
57
0
15
0
84
0.63
217332--217376
21
2.1
21
88
8
65
0
37
0
62
0.96
227088--227137
22
2.3
22
79
3
57
28
22
20
30
1.98
238551--238586
13
2.7
13
86
4
54
47
8
0
44
1.33
243874--243898
10
2.5
10
100
0
50
8
28
20
44
1.79
249046--249072
14
1.9
14
100
0
54
7
0
7
85
0.75
267839--267885
18
2.6
18
86
3
67
23
21
23
31
1.98
268573--268628
21
2.7
23
78
18
68
26
14
23
35
1.93
276864--276905
17
2.5
17
88
11
61
14
16
14
54
1.71
279298--279335
18
2.1
18
95
0
67
10
13
28
47
1.76
281632--281676
19
2.4
19
81
7
56
37
0
4
57
1.19

Tables:   1

The End!