Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013660.1 Kokia drynarioides strain JFW-HI SEQ_128688, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90146

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1909--1948
20
2.0
20
100
0
80
55
20
5
20
1.62
2012--2149
39
3.6
39
76
14
128
42
0
2
53
1.21
2054--2152
8
12.8
8
71
24
70
44
0
2
53
1.12
2027--2148
23
5.7
21
77
17
69
45
0
2
51
1.20
2086--2149
6
11.0
6
77
12
53
42
0
0
57
0.98
2088--2149
17
3.9
17
73
26
73
41
0
0
58
0.98
2086--2149
29
2.2
29
83
5
85
42
0
0
57
0.98
2177--2310
12
10.3
12
74
16
51
32
3
0
62
1.18
2177--2312
15
8.9
15
69
19
61
33
3
0
62
1.18
2260--2288
11
2.5
12
94
5
51
37
0
0
62
0.96
2177--2264
3
30.3
3
71
22
64
31
4
0
63
1.14
2238--2319
17
5.2
17
72
20
63
32
2
2
62
1.22
3344--3660
94
3.4
94
85
3
374
29
17
22
31
1.96
4428--4483
21
2.7
21
77
0
67
28
8
26
35
1.87
4829--4867
21
1.9
20
85
15
53
35
2
23
38
1.68
5824--5865
16
2.6
16
92
0
66
26
11
14
47
1.78
24930--24954
12
2.1
12
100
0
50
60
16
8
16
1.58
29706--29816
41
2.7
41
90
0
168
35
18
25
20
1.96
30656--30704
23
2.1
23
96
0
89
40
22
4
32
1.73
33747--33788
21
2.0
21
95
0
75
35
19
21
23
1.96
37233--37330
41
2.4
41
77
3
99
24
26
12
36
1.91
39898--40113
41
5.3
41
71
7
125
22
25
15
36
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39914--40113
81
2.4
83
80
4
208
22
24
15
37
1.93
40883--40941
27
2.2
27
100
0
118
49
6
11
32
1.66
41550--41620
8
8.8
8
75
14
65
45
0
1
53
1.09
41611--41668
26
2.2
26
87
6
82
56
13
0
29
1.38
47761--48040
43
6.5
43
89
1
384
24
19
27
28
1.98
53124--53194
21
3.4
21
80
7
90
25
11
25
38
1.89
59102--59137
19
1.9
20
88
11
58
75
2
0
22
0.94
59269--59305
17
2.2
17
100
0
74
51
18
0
29
1.47
60208--60268
7
8.9
7
80
10
54
37
26
16
19
1.93
60215--60271
14
4.2
13
80
8
60
35
26
19
19
1.95
65913--65948
2
18.0
2
88
0
54
47
5
0
47
1.25
67313--67365
7
7.6
7
82
0
70
30
24
26
18
1.98
76101--76139
18
2.2
18
90
0
60
51
7
10
30
1.64
78346--78456
26
4.3
25
81
3
114
25
20
22
31
1.98
78359--78464
52
2.0
53
81
5
126
22
20
22
33
1.97
80588--80631
22
2.0
22
91
4
72
9
0
40
50
1.34
84677--84708
3
10.7
3
100
0
64
31
0
0
68
0.90
87037--87074
20
1.9
20
88
0
58
52
26
10
10
1.68
87062--87105
21
2.1
21
83
8
54
36
20
18
25
1.95
87144--87187
21
2.2
20
87
4
61
11
0
38
50
1.39

Tables:   1

The End!