Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013662.1 Kokia drynarioides strain JFW-HI SEQ_128690, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79664

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3863--3897
15
2.3
15
100
0
70
11
31
0
57
1.34
8141--8182
20
2.0
20
86
4
57
59
2
14
23
1.47
15765--15804
16
2.5
16
87
0
62
47
5
17
30
1.69
16341--16391
20
2.4
21
81
15
61
50
0
3
45
1.20
16341--16393
21
2.5
21
82
14
65
49
0
3
47
1.19
19744--19783
21
2.0
20
90
5
62
57
0
0
42
0.98
35770--35820
6
8.5
6
95
0
84
49
0
29
21
1.50
36549--36636
6
15.3
6
77
12
78
46
1
1
51
1.15
36546--36626
11
7.3
11
76
12
76
41
1
1
55
1.15
36546--36635
17
5.3
16
76
10
81
44
1
1
53
1.15
37405--37478
3
23.3
3
79
8
76
56
4
4
35
1.37
37380--37488
46
2.4
43
78
13
105
55
4
4
35
1.41
38466--38632
30
5.6
29
78
12
133
35
26
3
34
1.74
38436--38641
29
6.9
29
78
13
145
35
26
3
33
1.75
38441--38633
59
3.3
57
81
7
206
37
25
3
33
1.74
47665--47815
83
1.8
81
88
2
230
29
7
14
47
1.73
48207--48250
11
3.8
11
81
6
52
77
2
2
18
0.98
59765--59802
18
2.1
18
90
9
60
36
0
5
57
1.21
67816--67855
17
2.3
17
95
4
71
60
5
12
22
1.52
76758--76832
29
2.5
30
89
6
107
33
5
13
48
1.65
76918--76985
6
11.8
6
79
14
81
44
1
1
52
1.19
76911--76984
17
4.4
17
87
0
112
43
1
1
54
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76908--76985
11
6.9
11
76
13
70
42
1
1
55
1.16
78801--79083
30
9.6
29
72
15
179
32
31
3
31
1.76
78801--79083
59
4.8
59
85
3
374
32
31
3
31
1.76
78805--79083
119
2.3
119
89
3
411
33
30
3
31
1.76

Tables:   1

The End!