Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013670.1 Kokia drynarioides strain JFW-HI SEQ_128698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  137090

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6331--6363
16
2.0
17
88
5
50
36
9
0
54
1.32
13601--13639
17
2.3
17
90
0
60
46
25
12
15
1.81
28766--28795
3
10.0
3
100
0
60
0
33
0
66
0.92
33112--33381
99
2.7
102
86
3
370
30
15
19
34
1.93
33316--33420
56
1.9
55
82
5
131
27
19
20
32
1.97
33371--33579
61
3.4
61
78
10
212
28
15
16
39
1.90
33399--33587
62
3.1
61
77
11
192
30
17
14
37
1.90
37334--37644
86
3.6
85
87
6
423
41
5
4
48
1.45
40086--40177
30
3.1
30
85
0
112
23
7
5
63
1.42
40129--40183
17
3.5
17
69
19
55
20
12
5
61
1.50
40128--40192
30
2.1
32
88
5
98
20
10
4
64
1.42
41047--41461
57
6.9
58
77
14
362
33
18
18
29
1.95
41010--41374
116
3.1
116
82
8
429
34
20
17
27
1.95
42980--43040
29
2.1
30
84
6
81
37
1
16
44
1.58
43937--43980
23
1.9
23
81
9
54
36
4
15
43
1.68
48807--48855
6
8.3
6
93
4
82
18
0
2
79
0.83
48810--48859
23
2.1
24
96
3
93
16
0
4
80
0.87
53332--53362
3
10.3
3
100
0
62
0
0
67
32
0.91
55415--55444
9
3.3
9
95
0
51
50
0
6
43
1.28
70785--70837
27
2.0
26
85
3
70
66
5
1
26
1.25
70811--70840
15
1.9
16
93
6
53
70
6
0
23
1.11
70956--71013
15
4.1
15
72
18
52
60
5
0
34
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74962--75036
24
3.1
24
94
0
123
24
12
9
54
1.66
76984--77058
24
3.1
24
90
3
116
21
12
12
54
1.69
77903--77961
17
3.4
17
77
13
66
71
1
23
3
1.11
86912--86940
7
4.1
7
100
0
58
13
27
13
44
1.82
91490--91626
58
2.3
59
76
9
154
35
12
15
36
1.85
92341--92376
12
3.1
12
92
8
56
41
0
2
55
1.14
93205--93440
57
4.0
59
81
10
245
30
15
18
36
1.92
93205--93442
115
2.0
118
84
7
317
29
15
18
36
1.91
94687--94716
6
5.0
6
91
0
51
13
16
3
66
1.37
98043--98084
21
2.0
21
81
9
50
52
21
2
23
1.59
98734--98839
40
2.5
43
90
6
164
29
21
12
36
1.90
100760--100949
105
1.8
104
87
3
283
35
23
13
28
1.92
100710--100954
52
4.7
52
75
9
196
35
24
13
26
1.93
102693--102742
23
2.2
23
96
3
93
16
4
34
46
1.65
105775--105810
3
12.0
3
100
0
72
33
0
0
66
0.92
106276--106300
13
1.9
13
100
0
50
12
0
0
88
0.53
108254--108279
4
6.5
4
100
0
52
76
0
0
23
0.78
112059--112100
2
21.0
2
100
0
84
50
0
50
0
1.00
112386--112418
6
5.5
6
96
0
57
15
66
0
18
1.25
113185--113357
83
2.1
84
98
1
339
38
3
9
48
1.52
113391--113503
59
1.9
59
87
3
165
45
5
7
42
1.54
126234--126263
2
15.0
2
92
0
51
50
0
3
46
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
130206--130239
7
4.9
7
100
0
68
14
41
0
44
1.45
130639--130667
14
2.0
15
93
6
51
41
3
0
55
1.17

Tables:   1

The End!