Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013703.1 Kokia drynarioides strain JFW-HI SEQ_128731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82223

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1248--1332
43
2.0
43
86
4
118
30
11
10
47
1.74
1899--2035
45
3.0
45
88
0
202
30
28
20
20
1.98
5840--5912
4
18.2
4
77
16
71
1
30
0
68
0.98
5840--5912
9
9.1
8
76
15
71
1
30
0
68
0.98
5840--5905
20
3.2
20
80
6
80
1
31
0
66
1.01
7056--7117
26
2.4
26
91
0
97
4
6
16
72
1.23
7068--7124
26
2.2
26
87
0
78
7
5
19
68
1.33
7115--7149
17
2.1
17
88
0
52
17
0
11
71
1.14
8150--8213
13
4.9
14
72
16
57
39
17
6
37
1.75
11752--11914
81
2.0
81
100
0
326
27
17
26
28
1.97
15262--15294
4
8.5
4
93
6
59
48
0
0
51
1.00
20505--20537
16
2.1
16
88
11
50
63
0
27
9
1.24
25038--25091
23
2.3
23
87
6
74
9
25
22
42
1.83
25114--25159
23
2.0
23
95
0
83
13
15
30
41
1.85
47986--48097
52
2.2
52
93
0
188
33
11
21
33
1.89
48085--48122
16
2.4
16
90
0
58
36
7
28
26
1.84
48033--48168
68
2.0
68
97
0
254
33
9
24
33
1.88
48101--48243
52
2.8
52
88
2
189
28
12
24
34
1.92
47986--48216
120
1.9
120
91
0
381
31
11
23
34
1.90
48439--48479
21
1.9
22
85
5
57
21
7
21
48
1.74
50255--50476
115
1.9
115
91
0
363
22
15
24
36
1.93
50781--50811
15
2.1
15
100
0
62
32
12
22
32
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53109--53147
11
3.5
11
83
13
53
17
33
25
23
1.96
54257--54291
3
11.7
3
100
0
70
31
0
0
68
0.90
55106--55325
110
2.0
110
98
0
422
33
5
30
30
1.80
56765--56844
22
3.5
22
77
16
74
11
25
25
38
1.88
58786--58831
19
2.3
20
88
7
67
47
2
0
50
1.13
58786--58842
19
2.9
20
82
10
64
47
1
0
50
1.11
59343--59380
17
2.3
17
86
4
51
63
0
23
13
1.30
64024--64059
17
2.1
17
94
0
63
36
19
5
38
1.75
64027--64066
17
2.4
17
86
0
53
35
20
2
42
1.65
69279--69339
31
2.0
31
86
0
86
21
18
11
49
1.78
76009--76052
16
2.7
17
79
10
56
34
0
6
59
1.24
77796--77838
18
2.4
18
80
7
52
46
2
0
51
1.13
79223--79281
31
1.9
31
92
0
100
50
10
5
33
1.58
82189--82223
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!