Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013719.1 Kokia drynarioides strain JFW-HI SEQ_128747, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65587

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8706--8771
26
2.5
26
77
0
78
42
1
15
40
1.56
8942--8998
23
2.4
24
80
11
64
45
1
1
50
1.22
8962--9019
24
2.5
24
83
5
66
50
1
0
48
1.11
17906--18003
34
2.9
33
86
4
133
35
30
12
21
1.90
17908--18024
34
3.4
34
83
4
103
39
29
11
20
1.87
18632--18656
10
2.5
10
100
0
50
40
16
0
44
1.47
23938--24014
34
2.3
34
90
0
118
40
31
11
16
1.85
25063--25093
16
1.9
16
93
0
53
29
12
0
58
1.35
28128--28152
6
4.2
6
100
0
50
32
16
0
52
1.44
31566--31610
18
2.6
17
86
6
56
68
4
4
22
1.25
31790--31820
16
1.9
16
93
0
53
70
3
0
25
1.02
32036--32099
4
17.2
4
77
18
59
76
3
1
18
1.00
32036--32099
7
8.6
8
75
17
59
76
3
1
18
1.00
32036--32100
10
5.9
11
81
13
73
76
3
1
18
0.99
32038--32116
41
1.9
42
85
10
110
74
3
3
17
1.12
32143--32215
13
5.5
13
75
15
60
75
4
1
19
1.04
33269--34301
50
20.7
50
80
1
863
25
19
15
39
1.91
39051--39115
12
5.4
12
75
13
55
18
1
1
78
0.91
39053--39113
17
3.9
16
70
25
51
19
1
1
77
0.95
42874--42907
17
2.0
17
88
0
50
64
2
2
29
1.22
42935--42976
11
3.8
11
78
12
50
76
2
0
21
0.90
42930--42976
22
2.4
18
83
16
58
76
2
0
21
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51502--51547
24
1.9
24
86
0
65
52
8
4
34
1.52
54917--54969
20
2.7
19
78
18
63
30
0
1
67
1.01
60017--60096
40
2.0
40
100
0
160
32
25
15
27
1.95
63894--63936
19
2.3
19
84
8
52
72
2
2
23
1.08
63894--63936
18
2.3
19
84
4
52
72
2
2
23
1.08

Tables:   1

The End!