Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013722.1 Kokia drynarioides strain JFW-HI SEQ_128750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  119798

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
307--333
9
3.0
9
100
0
54
22
0
0
77
0.76
2914--2964
22
2.4
21
83
6
66
50
1
5
41
1.37
3492--3533
18
2.3
19
80
12
52
19
0
2
78
0.86
5249--5317
9
8.4
9
76
20
71
53
0
2
43
1.15
5226--5315
38
2.3
39
88
5
146
48
0
3
47
1.18
5997--6068
35
2.1
35
91
0
117
38
1
38
20
1.62
14763--14810
23
2.1
23
84
0
60
31
27
14
27
1.95
15031--15071
21
1.9
21
85
5
55
65
4
12
17
1.42
18884--18918
7
5.0
7
100
0
70
42
42
0
14
1.45
22906--22948
17
2.6
16
88
7
59
20
20
2
55
1.54
31011--31049
20
2.0
20
85
10
53
71
7
2
17
1.21
40750--41103
123
2.9
122
91
1
573
38
11
8
42
1.70
47931--48167
119
1.9
124
84
8
317
40
8
7
44
1.62
50752--51044
40
7.4
40
75
9
217
26
16
23
33
1.95
50713--50980
40
6.8
39
79
7
238
25
15
23
35
1.94
51090--51225
50
2.7
50
81
0
155
19
24
18
37
1.94
62610--62698
30
3.0
30
80
9
110
14
23
29
32
1.94
63032--63056
13
1.9
13
100
0
50
32
8
8
52
1.60
67648--67704
24
2.4
24
87
0
78
38
5
8
47
1.57
68747--68793
24
2.0
24
87
8
69
38
6
8
46
1.60
73045--73071
2
13.5
2
100
0
54
51
0
0
48
1.00
79335--79382
22
2.2
21
77
3
51
50
0
14
35
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80229--80481
41
6.1
41
85
2
346
38
9
24
28
1.86
80229--80481
82
3.1
82
91
0
398
38
9
24
28
1.86
87456--87722
41
6.5
41
82
3
322
38
9
24
27
1.87
87456--87722
82
3.2
82
88
2
383
38
9
24
27
1.87
98303--98346
9
4.7
9
83
10
61
2
11
2
84
0.81
98303--98346
20
2.3
20
88
7
65
2
11
2
84
0.81
100737--100921
25
7.4
25
80
0
208
22
16
23
37
1.93
100738--100922
75
2.5
75
86
1
246
22
16
22
38
1.93
105481--105512
17
1.9
16
93
6
55
0
31
0
68
0.90
113414--113471
21
2.8
20
77
15
64
13
13
29
43
1.83

Tables:   1

The End!