Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013725.1 Kokia drynarioides strain JFW-HI SEQ_128753, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43574

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
180--224
9
5.0
9
88
0
72
0
51
0
48
1.00
180--224
18
2.5
18
100
0
90
0
51
0
48
1.00
225--266
4
10.2
4
84
5
57
0
21
0
78
0.75
209--274
21
3.0
22
82
8
71
1
27
0
71
0.95
225--266
12
3.4
12
90
6
66
0
21
0
78
0.75
336--370
15
2.3
15
95
0
61
60
25
0
14
1.35
3482--3516
17
2.1
17
89
5
54
31
2
0
65
1.07
4604--4671
29
2.3
29
82
5
84
48
5
1
44
1.36
9059--9085
4
6.8
4
100
0
54
77
0
0
22
0.76
10174--10203
6
5.0
6
95
0
51
20
0
0
80
0.72
10172--10203
12
2.5
13
90
10
57
21
0
0
78
0.76
10999--11046
22
2.2
22
100
0
96
20
0
16
62
1.33
19608--19660
21
2.7
20
82
5
63
60
5
3
30
1.37
19608--19645
19
1.9
19
89
5
58
60
5
0
34
1.19
19718--19865
19
7.9
18
70
14
68
59
3
1
35
1.23
19791--19873
21
4.3
20
73
15
61
59
3
0
37
1.15
19793--19843
21
2.4
22
83
12
70
56
5
0
37
1.23
19682--19911
9
24.7
9
68
13
90
58
3
2
34
1.30
20367--20518
10
16.0
10
70
18
69
38
1
1
57
1.21
20367--20518
19
8.0
19
68
16
84
38
1
1
57
1.21
20443--20517
38
2.0
38
84
10
100
42
0
1
56
1.08
20432--20507
28
2.7
27
80
6
89
43
0
1
55
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20538--20580
10
4.4
10
82
5
52
18
2
6
72
1.19
20548--20589
20
2.2
20
91
4
68
19
4
4
71
1.22
20531--20589
19
3.2
18
83
11
66
20
3
5
71
1.20
20555--20589
10
3.5
10
88
0
52
22
5
2
68
1.24
24602--24761
58
2.8
57
80
10
182
43
0
3
52
1.21
25634--25695
31
2.0
31
90
6
99
50
0
0
50
1.00
25676--25738
23
2.9
21
72
9
72
46
1
1
50
1.20
33085--33253
64
2.7
60
73
10
144
24
10
10
55
1.64
34203--34289
43
2.0
43
84
6
113
37
5
4
51
1.46
34459--34495
19
2.0
20
84
10
51
37
0
8
54
1.30
34601--34784
93
2.0
92
85
3
251
47
4
1
46
1.32
34725--34779
28
2.0
27
85
3
74
45
1
0
52
1.11

Tables:   1

The End!