Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013733.1 Kokia drynarioides strain JFW-HI SEQ_128761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  202521

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
354--425
4
17.5
4
77
11
65
0
36
0
63
0.94
354--426
21
3.5
20
80
10
85
0
36
0
63
0.95
598--652
27
2.0
27
86
6
76
12
34
21
30
1.91
3593--3625
2
16.5
2
100
0
66
48
0
0
51
1.00
6167--6213
24
1.9
24
82
4
58
19
12
10
57
1.64
15102--15162
5
12.2
5
76
0
50
36
19
8
36
1.82
15102--15149
20
2.4
20
85
0
60
31
20
10
37
1.87
31436--31499
29
2.2
29
100
0
128
50
12
14
23
1.76
39321--39617
144
2.1
144
94
1
524
47
14
16
21
1.82
42181--42222
21
2.0
21
86
4
59
54
11
2
30
1.49
64134--64168
6
5.8
6
100
0
70
34
51
14
0
1.42
65348--65372
6
4.2
6
100
0
50
0
0
16
84
0.63
75468--75492
2
12.5
2
100
0
50
52
0
0
48
1.00
76256--76312
29
2.0
29
89
0
87
40
8
15
35
1.79
82041--82077
14
2.6
14
95
0
65
29
29
5
35
1.80
82795--83174
207
1.9
201
91
4
618
48
14
14
22
1.79
89078--89129
25
2.1
25
92
0
86
38
0
1
59
1.08
106475--106663
93
2.0
93
84
4
247
31
7
10
50
1.64
120484--120510
7
3.9
7
100
0
54
0
11
0
88
0.50
140688--140718
1
31.0
1
100
0
62
0
0
0
100
0.00
140729--140760
1
32.0
1
100
0
64
0
0
0
100
0.00
141156--141193
17
2.2
18
90
4
60
89
0
2
7
0.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
141156--141193
10
4.1
9
86
13
51
89
0
2
7
0.57
141156--141186
10
3.2
10
95
4
55
93
0
0
6
0.35
147937--148148
88
2.4
90
77
5
216
38
19
8
33
1.83
148252--148340
29
3.0
28
73
10
79
60
4
2
32
1.29
148252--148362
30
3.8
28
73
10
80
63
3
1
30
1.21
148316--148382
19
3.5
19
78
10
64
65
4
0
29
1.12
148317--148384
20
3.5
20
80
13
79
64
4
0
30
1.13
148761--149015
89
2.9
88
79
9
293
34
9
18
37
1.84
158266--158297
7
4.6
7
100
0
64
15
43
28
12
1.83
166010--166044
2
17.5
2
100
0
70
48
0
0
51
1.00
171778--171949
57
3.0
57
99
0
335
34
6
30
27
1.82
187008--187041
16
2.1
17
88
5
52
26
17
14
41
1.88
191816--191846
4
7.8
4
92
0
53
48
22
3
25
1.66
196664--196702
6
6.5
6
87
0
51
46
0
30
23
1.53

Tables:   1

The End!