Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013757.1 Kokia drynarioides strain JFW-HI SEQ_128785, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51230

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2518--2550
15
2.2
15
89
10
50
36
9
6
48
1.60
3931--3978
20
2.3
20
85
7
60
70
0
0
29
0.87
3931--3979
24
2.1
22
85
7
62
71
0
0
28
0.86
5921--6017
47
2.1
46
84
5
124
7
7
17
68
1.37
5967--6040
35
2.1
35
84
0
94
8
6
17
67
1.38
5953--6029
23
3.3
22
70
10
64
7
6
18
67
1.37
6014--6077
22
2.9
22
81
11
69
7
3
14
75
1.15
6037--6084
22
2.2
21
85
7
60
8
2
12
77
1.08
6989--7042
8
6.8
8
78
16
58
31
0
7
61
1.24
6973--7029
23
2.5
23
82
2
62
29
0
3
66
1.08
6989--7042
15
3.4
16
80
12
58
31
0
7
61
1.24
7431--7469
20
2.0
20
100
0
78
7
15
25
51
1.70
12109--12135
4
6.8
4
100
0
54
0
0
22
77
0.76
15153--15189
15
2.5
15
90
0
65
32
29
35
2
1.72
15222--15252
16
2.0
16
93
6
55
67
0
32
0
0.91
15773--15989
30
7.3
30
79
6
210
37
24
0
37
1.62
15766--15989
59
3.8
58
80
5
209
37
23
0
37
1.61
15796--15989
89
2.2
88
83
5
239
37
25
1
35
1.63
15754--16006
30
8.5
30
77
7
194
37
23
1
37
1.65
16820--16872
25
2.1
25
96
0
97
43
16
32
7
1.76
20700--20751
22
2.2
25
83
10
74
13
21
28
36
1.91
20692--20756
23
2.9
22
81
2
76
13
21
26
38
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23109--23176
17
4.0
17
90
0
100
36
0
4
58
1.18
23127--23213
6
15.0
6
79
11
74
39
0
6
54
1.28
23640--23701
26
2.4
26
86
7
90
54
16
9
19
1.68
23640--23708
26
2.7
24
84
10
75
53
17
10
18
1.71
25006--25147
29
4.8
28
70
12
81
36
26
3
33
1.74
25067--25147
30
2.8
29
75
7
83
34
25
3
35
1.74
27548--28259
49
14.5
49
71
7
406
37
16
25
20
1.93
27532--28241
98
7.2
98
86
2
861
37
16
25
20
1.93
28047--28321
148
1.9
148
80
3
329
37
17
24
21
1.94
28570--28673
46
2.3
46
88
1
156
34
25
18
22
1.96
30623--30912
30
9.8
30
81
5
284
36
23
2
37
1.67
30623--30912
60
4.9
60
81
5
329
36
23
2
37
1.67
30619--30904
89
3.2
87
83
8
351
36
24
2
37
1.68
35953--35995
16
2.7
16
100
0
86
41
0
9
48
1.35
37921--37958
20
1.9
20
88
0
58
42
10
5
42
1.62
42071--42104
17
2.0
17
88
0
50
64
5
5
23
1.38
42935--42988
23
2.3
23
90
0
81
25
22
24
27
2.00
43239--43320
41
2.0
41
92
0
137
32
24
14
28
1.94
43217--43469
104
2.6
98
83
10
320
34
25
14
26
1.94
43280--43496
52
4.2
52
93
0
353
34
25
14
25
1.94
43750--43774
13
1.9
13
100
0
50
52
8
0
40
1.31
45354--45661
150
2.1
149
82
6
374
26
16
5
51
1.65

Tables:   1

The End!