Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013758.1 Kokia drynarioides strain JFW-HI SEQ_128786, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85229

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1997--2021
2
12.5
2
100
0
50
0
0
48
52
1.00
12558--12618
23
2.6
23
80
12
63
44
0
1
54
1.10
16064--16102
17
2.3
17
82
13
53
53
0
0
46
1.00
17692--17725
17
2.0
17
88
0
50
52
0
0
47
1.00
17979--18032
28
1.9
28
88
0
81
42
3
3
50
1.38
18602--18626
7
3.6
7
100
0
50
84
0
0
16
0.63
21198--21247
26
2.0
25
88
4
73
52
2
2
44
1.24
21604--21647
22
2.0
22
100
0
88
45
9
9
36
1.68
24974--25019
20
2.3
20
84
0
56
54
2
0
43
1.12
41679--41750
37
1.9
37
94
0
126
36
8
30
25
1.85
42317--42349
17
1.9
17
88
11
50
24
0
6
69
1.10
45569--45598
13
2.3
13
100
0
60
23
26
16
33
1.96
45817--45868
26
2.0
26
81
11
61
30
7
9
51
1.62
46741--46786
18
2.6
18
77
19
51
47
4
6
41
1.49
48970--49023
28
1.9
27
85
7
72
24
5
35
35
1.79
48980--49040
28
2.1
28
84
3
77
26
8
31
34
1.86
49051--49136
30
2.9
30
71
20
81
34
6
26
31
1.83
49027--49480
59
7.7
59
79
7
399
35
5
25
33
1.79
49058--49393
29
11.5
27
67
19
108
35
5
24
34
1.78
49034--49480
117
3.8
116
80
6
438
35
5
25
33
1.78
49027--49421
176
2.2
175
82
5
479
35
5
25
33
1.79
49390--49509
30
4.1
28
80
11
125
38
5
26
30
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49083--49485
58
6.9
58
79
8
273
35
4
26
33
1.77
54755--54828
17
4.4
17
80
0
85
55
5
1
37
1.31
54763--54815
11
4.7
11
73
13
54
60
3
1
33
1.26
54768--54840
34
2.1
34
82
5
85
60
8
1
30
1.34
56900--56942
18
2.4
18
100
0
86
32
25
16
25
1.96
57113--57149
16
2.2
17
90
4
58
43
2
2
51
1.30
57360--57406
20
2.5
20
86
10
64
46
4
0
48
1.21
57616--57650
13
2.6
13
86
4
52
42
5
0
51
1.25
58470--58513
15
3.0
14
78
12
52
59
2
0
38
1.10
58455--58521
21
3.0
21
82
10
71
55
1
1
41
1.18
58462--58521
24
2.6
22
82
15
77
55
1
0
43
1.10
58705--58743
18
2.4
16
87
12
53
7
28
17
46
1.76
58711--58746
18
2.0
18
100
0
72
11
27
16
44
1.82
60154--60204
25
2.0
25
96
0
93
41
17
17
23
1.90
68314--68338
13
1.9
13
100
0
50
12
0
0
88
0.53
68592--68664
31
2.4
30
75
4
74
42
6
9
41
1.64
69010--69038
15
2.0
15
93
6
51
24
0
6
68
1.13
69681--69728
24
1.9
25
87
8
71
31
4
14
50
1.62
73847--73905
17
3.4
17
80
4
64
25
0
3
71
1.02
73929--73979
22
2.2
25
80
13
65
47
0
1
50
1.12
74053--74099
24
2.0
23
87
4
67
31
8
10
48
1.68
76059--76269
91
2.3
91
84
4
282
29
14
16
40
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
78288--78341
19
2.8
19
80
8
74
66
1
5
25
1.23
78234--78341
9
11.9
9
67
16
53
61
0
6
31
1.28
78511--78599
39
2.3
39
78
7
92
38
3
1
57
1.23
78583--78635
28
1.9
27
84
3
70
35
1
3
58
1.27
78810--78968
84
1.9
83
81
3
194
35
7
14
42
1.74
83549--83630
30
2.7
30
79
5
85
34
7
7
51
1.58
84897--84927
3
10.3
3
100
0
62
32
35
0
32
1.58

Tables:   1

The End!