Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013759.1 Kokia drynarioides strain JFW-HI SEQ_128787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100034

Tables:   1   

This is table  1  of  1  ( 50 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9619--9807
29
6.5
28
76
16
163
33
4
29
32
1.78
9629--9866
59
4.2
57
77
14
235
33
4
28
33
1.78
9656--9807
30
5.2
31
79
15
121
31
5
28
34
1.79
9788--9828
20
2.0
20
85
9
55
39
2
26
31
1.70
11144--11169
1
26.0
1
100
0
52
0
0
0
100
0.00
11635--11701
6
11.7
6
74
15
61
52
1
0
46
1.09
11637--11701
17
3.8
17
89
0
103
53
1
0
44
1.09
13715--13743
5
5.8
5
100
0
58
0
37
0
62
0.96
19394--19459
30
2.2
31
91
2
107
46
1
0
51
1.10
19734--19917
10
18.8
10
69
18
95
31
3
2
62
1.25
19739--19919
19
9.4
17
68
22
76
30
3
2
62
1.25
19758--19846
28
3.1
29
80
15
105
29
3
1
66
1.15
19833--19909
41
1.9
40
84
7
102
31
2
2
63
1.21
22331--22631
150
2.0
150
90
1
469
29
22
18
29
1.98
26300--26338
19
2.1
19
95
0
69
41
15
17
25
1.89
29425--29464
20
2.1
19
90
4
62
37
5
5
52
1.45
31719--31763
3
15.0
3
100
0
90
66
0
0
33
0.92
32702--32759
21
2.7
21
82
10
64
31
1
5
62
1.27
32702--32750
23
2.3
23
86
10
68
32
2
2
63
1.17
32829--32855
3
9.0
3
100
0
54
66
0
0
33
0.92
37298--37342
19
2.3
19
92
3
72
31
15
17
35
1.92
37934--37981
11
4.4
11
81
0
51
64
8
4
22
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40606--40649
21
2.0
21
83
12
54
34
0
0
65
0.93
40704--40751
23
2.2
21
85
7
60
62
6
0
31
1.20
43274--43327
28
1.9
28
100
0
108
29
25
7
37
1.83
44155--44197
17
2.5
17
96
0
77
41
0
0
58
0.98
44835--44864
3
10.0
3
100
0
60
33
0
0
66
0.92
44906--44967
3
20.3
3
83
9
72
59
0
1
38
1.07
44905--44967
22
3.0
20
86
9
81
58
0
1
39
1.07
46029--46248
30
7.5
29
74
10
164
34
28
4
33
1.76
47399--47441
17
2.6
17
82
10
54
51
6
2
39
1.42
47772--47807
18
2.0
18
94
0
63
52
13
5
27
1.63
47863--48141
152
1.8
150
80
12
329
24
35
0
39
1.59
48927--48955
12
2.4
12
100
0
58
44
6
10
37
1.65
53688--53729
5
8.2
5
82
15
50
42
2
0
54
1.13
53679--53767
17
5.6
17
74
9
73
43
1
1
53
1.15
57893--57923
16
1.9
16
100
0
62
45
0
6
48
1.28
57471--58339
461
1.9
461
97
0
1657
27
12
17
43
1.84
64948--65057
52
2.1
52
100
0
220
40
7
24
27
1.81
67607--67668
20
3.0
20
78
2
70
14
20
27
37
1.92
67614--67669
27
2.1
27
86
6
78
16
19
25
39
1.91
70471--70549
39
2.0
39
87
0
113
34
25
11
29
1.91
73471--73523
23
2.3
23
75
9
56
50
1
1
45
1.23
74798--74822
11
2.3
11
100
0
50
16
0
0
84
0.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75397--75433
17
2.2
17
90
0
56
70
2
0
27
1.01
76062--76099
20
1.9
20
94
0
67
42
0
0
57
0.98
76062--76106
20
2.2
20
88
4
63
48
0
0
51
1.00
86368--86419
22
2.4
22
86
0
77
28
32
13
25
1.93
92895--92975
42
1.9
42
97
0
153
39
18
13
28
1.89
99630--99671
21
2.0
21
90
0
66
52
16
11
19
1.74

Tables:   1

The End!