Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013783.1 Kokia drynarioides strain JFW-HI SEQ_128811, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58429

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1993--2204
49
4.6
49
74
15
225
23
25
14
37
1.92
2039--2203
86
1.9
86
93
0
285
23
25
13
37
1.92
2242--2495
125
2.0
124
91
0
409
24
19
18
37
1.94
2290--2805
210
2.5
210
86
1
721
24
20
17
38
1.93
15165--15519
29
12.0
29
77
10
265
38
1
22
37
1.66
15179--15519
59
5.8
59
81
6
361
38
1
22
37
1.65
16218--16254
3
12.3
3
100
0
74
32
0
0
67
0.91
16372--16418
4
11.5
4
82
13
60
29
0
0
70
0.88
16955--17002
19
2.5
19
82
0
69
54
4
10
31
1.53
22813--22849
16
2.2
17
90
9
58
43
0
0
56
0.99
22811--22850
18
2.3
18
83
16
57
42
0
0
57
0.98
22975--23040
29
2.2
29
83
5
78
48
15
12
24
1.78
25561--25718
76
2.1
77
82
8
189
34
18
15
31
1.93
29075--29101
6
4.5
6
100
0
54
66
0
0
33
0.92
29075--29114
18
2.2
18
86
0
53
62
0
7
30
1.23
43198--43682
40
12.3
40
73
11
297
28
25
18
26
1.98
43197--43681
79
6.1
79
81
3
496
29
25
18
26
1.98
44705--44760
20
2.8
19
76
10
58
12
3
7
76
1.11
51445--51486
16
2.7
15
79
13
50
47
33
0
19
1.49

Tables:   1

The End!