Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013785.1 Kokia drynarioides strain JFW-HI SEQ_128813, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  192177

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14123--14181
27
2.2
27
78
6
66
64
1
32
1
1.13
29469--29507
16
2.4
17
83
16
55
66
0
20
12
1.24
38677--38743
14
4.5
15
75
10
57
50
2
1
44
1.26
38701--38743
16
2.8
16
80
13
54
44
2
2
51
1.27
41077--41115
19
2.1
19
100
0
78
43
20
10
25
1.83
44314--44376
28
2.2
28
94
0
108
39
17
20
22
1.92
47366--47485
57
2.1
57
81
4
134
49
5
18
27
1.68
49541--49617
29
2.6
29
87
8
93
44
14
1
40
1.53
52296--52330
17
2.0
18
94
5
63
22
5
2
68
1.24
56012--56055
23
1.9
23
100
0
88
22
29
25
22
1.99
60414--60447
15
2.3
15
90
5
52
5
11
8
73
1.24
85215--85276
24
2.6
25
82
14
78
45
8
14
32
1.74
91664--91709
12
3.8
11
83
16
56
2
19
0
78
0.86
97314--97373
29
2.1
29
100
0
120
25
20
16
38
1.93
97413--97443
16
1.9
16
93
0
53
22
12
22
41
1.88
108680--108719
11
3.7
11
83
3
55
12
15
47
25
1.80
112189--112337
42
3.5
42
80
4
167
20
20
20
38
1.94
122324--122387
15
4.3
15
78
4
58
29
28
23
18
1.98
122324--122387
30
2.1
30
85
5
85
29
28
23
18
1.98
134155--134222
33
2.1
33
97
0
127
55
16
4
23
1.58
139138--139184
10
4.8
10
97
2
87
31
40
17
10
1.83
145577--145602
9
2.9
9
100
0
52
34
11
30
23
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
150888--150923
18
2.1
17
90
10
56
33
5
0
61
1.19
151063--151108
17
2.8
17
83
9
51
34
10
8
45
1.70
152001--152376
187
2.0
188
85
4
517
42
19
10
27
1.84
155010--155051
3
14.0
3
100
0
84
33
0
0
66
0.92
155467--155846
148
2.5
145
80
7
433
44
4
9
41
1.56
159219--159270
4
12.0
4
91
2
59
67
1
7
23
1.27
160291--160315
12
2.1
12
100
0
50
40
16
8
36
1.77
168239--168279
14
2.9
14
89
10
66
78
0
19
2
0.87
168672--168832
42
3.9
42
89
0
225
21
16
24
37
1.93
168800--168858
30
2.0
30
96
0
109
20
18
35
25
1.95
168762--168905
72
2.0
73
87
4
211
22
17
27
33
1.96
168830--169116
42
6.9
42
80
7
298
22
18
21
37
1.94
168720--169073
114
3.0
114
76
11
311
22
17
24
36
1.95
168835--169100
84
3.2
82
83
6
345
22
18
21
37
1.94
168835--169116
126
2.2
125
84
3
368
22
17
21
37
1.94
169445--169475
3
10.3
3
100
0
62
35
0
0
64
0.94
169917--170228
146
2.1
148
86
4
427
43
3
9
43
1.55
169989--170285
146
2.0
143
82
8
359
44
3
10
41
1.55
173304--173349
14
3.3
14
82
17
60
71
8
15
4
1.26
173762--173808
17
2.7
17
78
15
51
59
0
0
40
0.97
187109--187185
24
3.4
23
77
13
79
29
10
22
37
1.87
187571--187606
18
1.9
19
88
5
56
13
8
16
61
1.56

Tables:   1

The End!