Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013786.1 Kokia drynarioides strain JFW-HI SEQ_128814, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  120827

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4971--5009
17
2.3
17
90
0
60
15
12
25
46
1.81
7616--7667
3
17.0
3
84
4
68
32
3
1
61
1.25
12303--12340
14
2.7
14
100
0
76
5
0
26
68
1.11
12281--12332
22
2.4
22
83
6
61
3
1
26
67
1.18
21338--21369
15
2.1
15
94
0
55
62
3
9
25
1.40
21417--21453
19
1.9
19
88
0
56
51
0
0
48
1.00
21399--21455
15
3.5
15
69
17
51
47
1
0
50
1.11
21488--21524
16
2.3
16
86
13
58
40
0
0
59
0.97
21535--21584
16
3.2
16
70
18
52
52
0
0
48
1.00
21519--21581
29
2.2
27
83
13
74
53
0
1
44
1.10
21519--21602
28
3.0
26
77
19
73
53
0
2
44
1.13
21850--21888
19
2.1
19
95
0
69
33
5
2
58
1.33
22030--22079
2
25.0
2
100
0
100
50
0
0
50
1.00
22649--22692
18
2.5
18
79
17
56
47
2
6
43
1.42
27489--27545
15
3.8
15
78
17
64
52
7
14
26
1.66
27490--27550
30
2.0
30
84
6
79
49
4
14
31
1.65
33302--33345
23
2.0
23
90
4
72
63
2
11
22
1.38
42845--43070
26
8.7
26
78
8
167
34
15
23
26
1.95
42869--43075
104
2.0
104
83
1
263
33
16
24
26
1.96
46604--46656
19
2.8
18
76
15
54
62
1
9
26
1.36
46730--46771
19
2.2
20
86
4
59
35
0
0
64
0.94
48089--48149
21
2.9
21
81
13
72
65
4
0
29
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48164--48227
27
2.4
26
79
5
74
59
0
4
35
1.18
48226--48269
22
2.0
22
100
0
88
63
0
0
36
0.95
62370--62399
15
2.0
15
93
0
51
43
30
6
20
1.77
63366--63416
15
3.3
15
82
15
68
70
0
19
9
1.14
93802--93835
6
5.7
6
100
0
68
17
0
47
35
1.48
95218--95281
22
3.0
22
81
2
58
34
3
0
62
1.11
99856--99905
19
2.7
20
72
12
52
64
0
0
36
0.94
100232--100281
22
2.3
22
92
0
82
50
10
18
22
1.76
100666--100712
22
2.2
22
96
3
87
76
4
4
14
1.09
119419--119675
30
8.6
30
79
7
231
36
26
2
34
1.71
119419--119670
89
2.8
89
78
9
264
36
25
2
34
1.71
119456--119674
119
1.8
119
82
5
282
34
28
2
34
1.70
119447--119726
119
2.4
120
76
8
281
36
27
2
33
1.70

Tables:   1

The End!