Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013799.1 Kokia drynarioides strain JFW-HI SEQ_128827, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52389

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1534
216
7.3
209
77
9
1273
26
17
14
41
1.88
13--1535
419
3.6
412
76
11
1284
26
17
14
40
1.88
1604--1766
55
3.0
55
83
5
188
33
22
15
27
1.95
1745--1876
28
4.8
28
81
12
146
39
27
11
21
1.88
4942--4971
6
5.0
6
91
0
51
53
0
30
16
1.44
9923--9987
34
1.9
34
93
0
112
43
12
6
38
1.67
10205--10455
125
2.0
124
86
5
355
23
19
23
33
1.97
10504--10910
36
11.2
37
85
6
491
27
24
14
34
1.94
10504--10910
74
5.6
72
82
9
474
27
24
14
34
1.94
11625--11692
22
3.2
20
76
19
66
50
26
0
23
1.50
13083--13323
117
2.0
119
93
2
414
18
8
27
46
1.77
13475--13504
14
2.2
14
94
5
53
60
6
0
33
1.23
14794--14856
32
2.0
32
83
0
81
41
17
7
33
1.79
17547--17645
39
2.5
39
93
0
171
53
16
5
25
1.63
18431--18493
32
2.0
32
87
0
90
36
19
11
33
1.87
18539--18637
39
2.5
39
93
0
171
53
16
5
25
1.63
16994--18978
992
2.0
990
93
1
3422
35
18
19
27
1.95
21210--21235
12
2.2
12
100
0
52
50
7
15
26
1.71
25779--25876
39
2.5
39
83
1
135
52
14
8
25
1.69
28474--28586
48
2.4
48
86
0
145
52
13
10
23
1.71
31594--31650
27
2.2
25
82
17
73
8
22
3
64
1.37
34864--34982
48
2.5
48
88
0
175
52
13
8
26
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35740--35841
26
3.9
26
88
0
141
22
15
23
38
1.93
38678--38902
25
9.0
25
84
2
272
32
22
18
26
1.97
43178--43224
12
3.9
12
78
10
51
2
36
0
61
1.08
51822--51886
29
2.2
29
91
0
103
24
9
24
41
1.84

Tables:   1

The End!