Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013803.1 Kokia drynarioides strain JFW-HI SEQ_128831, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  164226

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20085--20146
32
2.0
32
83
3
81
6
17
8
67
1.37
32223--32264
20
2.0
21
86
4
59
54
0
2
42
1.13
40892--40945
15
3.5
15
71
14
56
59
5
5
29
1.43
40890--40957
31
2.3
30
82
5
93
57
4
4
33
1.39
43506--43637
58
2.3
58
78
2
140
43
10
18
26
1.83
44023--44068
21
2.1
22
84
8
58
4
21
0
73
1.00
44555--44603
3
16.0
3
82
4
62
32
2
2
63
1.17
45311--45376
6
10.8
6
71
9
53
57
1
3
37
1.23
45754--45804
21
2.4
22
87
6
70
13
17
3
64
1.42
46037--46070
14
2.2
16
90
10
54
50
5
0
44
1.26
46040--46070
16
1.9
16
93
0
53
48
6
0
45
1.28
53236--53261
3
8.7
3
100
0
52
34
0
0
65
0.93
56155--56236
39
2.1
40
90
2
130
37
2
4
54
1.35
56707--56757
26
2.0
26
84
7
68
37
0
3
58
1.16
59183--59216
7
4.9
7
100
0
68
70
0
0
29
0.87
61809--61850
3
14.0
3
94
0
75
2
0
30
66
1.04
61896--61998
17
6.1
17
86
2
136
38
3
1
55
1.29
61898--62019
6
21.0
6
69
17
71
41
3
2
52
1.31
61915--61999
11
7.5
11
71
9
64
38
4
2
54
1.34
61884--61990
51
2.1
51
82
3
126
39
5
2
52
1.40
63722--64022
30
10.2
31
75
15
132
36
24
1
37
1.66
63749--63974
30
7.7
29
77
13
187
36
23
1
38
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63748--64000
89
2.9
87
84
4
305
35
24
1
37
1.67
63719--63982
59
4.5
59
81
7
279
35
24
1
38
1.65
63966--64126
57
2.8
55
75
13
157
39
26
2
31
1.70
63719--64134
29
14.2
29
74
11
216
37
25
1
35
1.67
66414--66458
3
15.0
3
100
0
90
33
0
0
66
0.92
67011--67113
51
2.0
51
100
0
206
38
7
5
47
1.57
67228--67363
59
2.3
60
87
3
186
25
14
13
46
1.81
67562--67700
31
4.5
31
72
19
114
48
10
13
27
1.76
81224--81256
7
4.9
7
85
7
50
18
0
0
81
0.68
81223--81254
13
2.5
13
94
0
55
18
0
0
81
0.70
83378--83515
70
2.0
70
98
0
267
28
18
13
39
1.88
100199--100526
111
3.0
111
91
0
541
32
13
17
37
1.88
116007--116055
20
2.5
20
100
0
98
46
6
8
38
1.58
116868--117061
97
2.0
97
94
2
345
37
14
6
41
1.72
134860--134901
21
2.0
21
85
4
57
54
4
11
28
1.57
137552--137584
16
2.0
17
88
5
50
12
3
27
57
1.49
139569--139638
35
2.0
35
100
0
140
28
17
25
28
1.97
141773--141831
24
2.5
24
81
10
59
37
5
0
57
1.21
141798--141966
58
2.9
57
80
9
182
45
2
1
50
1.22
151129--151154
13
2.0
13
100
0
52
23
15
15
46
1.83
157652--157703
15
3.4
15
75
12
52
42
3
1
51
1.31
158619--158706
44
2.0
44
82
6
106
50
1
20
28
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
160369--160405
18
2.1
18
89
0
56
48
0
27
24
1.51
160533--160611
37
2.1
38
85
2
106
21
17
26
34
1.96
162169--162253
34
2.5
34
77
7
93
65
0
1
32
1.00
162220--162263
18
2.3
19
88
7
63
70
0
2
27
0.99
162142--162347
9
21.0
10
66
20
55
64
1
3
30
1.20

Tables:   1

The End!